myRT

myRT report for GCA_001607185.1_ASM160718v1

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Seq: LOGA01000127.1 Escherichia coli strain STEC 1225 STEC1225_contig_27, whole genome shotgun sequence (42226 bp)
Overview 1 RT 1: 37587-41686 bp Neighborhood of RT #1 [37587, 41686] RutF PRK01271 RVT-GII GIIM Feature: gene Location: 37587-38156 bp Feature: domain Description: RutF Location: 37641-38145 bp Feature: domain Description: RutF Location: 37641 -381 45 bp Feature: gene Location: 38160-38303 bp Feature: domain Description: PRK01271 Location: 38163-38301 bp Feature: domain Description: PRK01 271 Location: 381 63-38301 bp Feature: gene Location: 38451-39773 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38727-39384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 38727-39384 bp Feature: domain Description: GIIM Note: maturase Location: 39468-39678 bp Feature: domain Description: GIIM Note: maturase Location: 39468-39678 bp Feature: gene Location: 40299-40643 bp Feature: gene Location: 41288-41686 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RutF (TIGR03615), PRK01271 (tautomerase PptA), RVT-GII, GIIM (pfam08388)

Seq: LOGA01000046.1 Escherichia coli strain STEC 1225 STEC1225_contig_14, whole genome shotgun sequence (208411 bp)
Overview 1 RT 1: 39389-45394 bp Neighborhood of RT #1 [39389, 45399] DinI RVT-Retrons Q P Feature: gene Location: 39389-39622 bp Feature: domain Description: DinI Location: 39431-39617 bp Feature: domain Description: DinI Location: 39431-39617 bp Feature: gene Location: 39815-40150 bp Feature: gene Location: 40796-42552 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40940-41561 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 40940-41561 bp Feature: gene Location: 42602-43633 bp Feature: domain Description: Q Location: 42605-43628 bp Feature: domain Description: Q Location: 42 605-4362 8 bp Feature: gene Location: 43633-45399 bp Feature: domain Description: P Location: 43660-45394 bp Feature: domain Description: P Location: 43660-45394 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DinI (pfam06183), RVT-Retrons, Q (PHA02536), P (PHA02535)