myRT

myRT report for GCA_001608125.1_ASM160812v1

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Seq: LOGP01000045.1 Escherichia coli strain STEC 1528 STEC1528_contig_5, whole genome shotgun sequence (423024 bp)
Overview 1 RT 1: 84140-88325 bp Neighborhood of RT #1 [84140, 88348] HTH_XRE RVT-Retrons PRK13889 TraD Feature: gene Location: 84140-84355 bp Feature: gene Location: 84446-84727 bp Feature: domain Description: HTH_XRE Location: 84461-84626 bp Feature: domain Description: HTH_XRE Location: 84461 -84626 bp Feature: gene Location: 84720-85820 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 84861-85413 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 84861 -8541 3 bp Feature: gene Location: 85892-87397 bp Feature: domain Description: PRK13889 Location: 85895-86495 bp Feature: domain Description: PRK1 3889 Location: 85895-86495 bp Feature: gene Location: 88043-88348 bp Feature: domain Description: TraD Location: 88151-88325 bp Feature: domain Description: TraD Location: 881 51 -88325 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, PRK13889 (conjugal transfer relaxase TraA; Provisional), TraD (pfam06412)