myRT

myRT report for GCA_001612535.1_ASM161253v1

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Seq: LVYU01000156.1 Rhizobium leguminosarum strain Vaf12 Vaf12_contig_9, whole genome shotgun sequence (269824 bp)
Overview 1 RT 1: 17921-23073 bp Neighborhood of RT #1 [17921, 23073] AAA_13 RVT-CRISPR-like Feature: gene Location: 17921-19279 bp Feature: gene Location: 19534-19968 bp Ori: KZA96490.1 Feature: domain Description: AAA_13 Location: 19549-19798 bp Feature: domain Description: AAA_1 3 Location: 1 9549-1 9798 bp Feature: gene Location: 20075-21466 bp Ori: KZA96491.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 20522-21014 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 20522-21 01 4 bp Feature: gene Location: 21639-21995 bp Feature: gene Location: 22270-23073 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_13 (pfam13166), RVT-CRISPR

Seq: LVYU01000139.1 Rhizobium leguminosarum strain Vaf12 Vaf12_contig_74, whole genome shotgun sequence (41230 bp)
Overview 1 RT 1: 10150-12434 bp Neighborhood of RT #1 [10150, 12559] DUF995 RVT-Retrons HTH_XRE Feature: gene Location: 10150-10659 bp Ori: KZA97083.1 Feature: domain Description: DUF995 Location: 10204-10612 bp Feature: domain Description: DUF995 Location: 102 04-10612 bp Feature: gene Location: 10889-11107 bp Feature: gene Location: 11194-11820 bp Ori: KZA97085.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 11203-11464 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 112 03-11464 bp Feature: gene Location: 11917-12195 bp Feature: gene Location: 12236-12559 bp Ori: KZA97087.1 Feature: domain Description: HTH_XRE Location: 12272-12434 bp Feature: domain Description: HTH_XRE Location: 12 2 72 -12 434 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF995 (pfam06191), RVT-Retrons, HTH_XRE (smart00530)

Seq: LVYU01000010.1 Rhizobium leguminosarum strain Vaf12 Vaf12_contig_107, whole genome shotgun sequence (1841 bp)
Overview 1 RT 1: 89-1292 bp Neighborhood of RT #1 [89, 1450] RVT-GII GIIM Feature: gene Location: 89-1450 bp Ori: KZB03215.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-1028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 416-1028 bp Feature: domain Description: GIIM Note: maturase Location: 1085-1292 bp Feature: domain Description: GIIM Note: maturase Location: 1085-1292 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)