myRT

myRT report for GCA_001613225.1_ASM161322v1

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Seq: BDBY01000207.1 Nocardia pseudovaccinii NBRC 100343 DNA, contig: NP3_CON02801, strain: NBRC 100343, whole genome shotgun sequence (106037 bp)
Overview 1 RT 1: 724-3331 bp Neighborhood of RT #1 [724, 3331] RVT-GII Intron_maturas2 Feature: gene Location: 724-2232 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 985-1783 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 985-1 783 bp Feature: domain Description: Intron_maturas2 Location: 1903-2119 bp Feature: domain Description: Intron_maturas2 Location: 1 903-21 1 9 bp Feature: gene Location: 2512-2793 bp Feature: gene Location: 2918-3331 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: BDBY01000379.1 Nocardia pseudovaccinii NBRC 100343 DNA, contig: NP3_CON07301, strain: NBRC 100343, whole genome shotgun sequence (24189 bp)
Overview 1 RT 1: 8166-18956 bp Neighborhood of RT #1 [8166, 18956] INT_RitB_C_like Phage_int_SAM_1 INT_RitC_C_like RVT-GII HEAT_2 HEAT_2 RVT-GII Intron_maturas2 Resolvase Recombinase Zn_ribbon_recom arc_metj RVT-GII Feature: gene Location: 8166-9140 bp Feature: domain Description: INT_RitB_C_like Location: 8493-9072 bp Feature: domain Description: INT_RitB_C_like Location: 8493-9072 bp Feature: gene Location: 9130-10134 bp Feature: domain Description: Phage_int_SAM_1 Location: 9175-9424 bp Feature: domain Description: Phage_int_SAM_1 Location: 9175-942 4 bp Feature: domain Description: INT_RitC_C_like Location: 9505-10054 bp Feature: domain Description: INT_RitC_C_like Location: 9505-10054 bp Feature: gene Location: 10157-10900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10418-10799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10418-10799 bp Feature: gene Location: 11555-13078 bp Feature: domain Description: HEAT_2 Location: 11600-11699 bp Feature: domain Description: HEAT_2 Location: 11600-11699 bp Feature: domain Description: HEAT_2 Location: 11891-12113 bp Feature: domain Description: HEAT_2 Location: 11891-12 113 bp Feature: gene Location: 13237-14205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13294-13489 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 132 94-13489 bp Feature: domain Description: Intron_maturas2 Location: 13579-13810 bp Feature: domain Description: Intron_maturas2 Location: 13579-13810 bp Feature: gene Location: 14300-16018 bp Feature: domain Description: Resolvase Location: 14312-14750 bp Feature: domain Description: Resolvase Location: 14312 -14750 bp Feature: domain Description: Recombinase Location: 14837-15203 bp Feature: domain Description: Recombinase Location: 14837-152 03 bp Feature: domain Description: Zn_ribbon_recom Location: 15242-15431 bp Feature: domain Description: Zn_ribbon_recom Location: 152 42 -15431 bp Feature: gene Location: 16148-16435 bp Feature: domain Description: arc_metj Location: 16298-16412 bp Feature: domain Description: arc_metj Location: 162 98-16412 bp Feature: gene Location: 16567-17253 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16828-17215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1682 8-172 15 bp Feature: gene Location: 17921-18097 bp Feature: gene Location: 18150-18956 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT INT_RitB_C_like (cd00797), Phage_int_SAM_1 (pfam02899), INT_RitC_C_like (cd01182), RVT-GII, HEAT_2 (pfam13646), Intron_maturas2 (pfam01348), Resolvase (smart00857), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), arc_metj (LOAD_arc_metj)

Seq: BDBY01000429.1 Nocardia pseudovaccinii NBRC 100343 DNA, contig: NP3_CON10301, strain: NBRC 100343, whole genome shotgun sequence (15557 bp)
Overview 1 RT 1: 1-4065 bp Neighborhood of RT #1 [1, 4454] RVT-GII GIIM Beta-lactamase Feature: gene Location: 1-354 bp Feature: gene Location: 545-2017 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 884-1580 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 884-1580 bp Feature: domain Description: GIIM Note: maturase Location: 1649-1874 bp Feature: domain Description: GIIM Note: maturase Location: 1649-1874 bp Feature: gene Location: 2440-2718 bp Feature: gene Location: 3087-4454 bp Feature: domain Description: Beta-lactamase Location: 3126-4065 bp Feature: domain Description: Beta-lactamase Location: 3 126-4065 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), Beta-lactamase (pfam00144)

Seq: BDBY01000468.1 Nocardia pseudovaccinii NBRC 100343 DNA, contig: NP3_CON90625, strain: NBRC 100343, whole genome shotgun sequence (1993 bp)
Overview 1 RT 1: 30-1784 bp Neighborhood of RT #1 [30, 1879] RVT-GII GIIM Feature: gene Location: 30-188 bp Feature: gene Location: 233-1879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 857-1481 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 857-14 81 bp Feature: domain Description: GIIM Note: maturase Location: 1574-1784 bp Feature: domain Description: GIIM Note: maturase Location: 1574 -1784 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)