myRT

myRT report for GCA_001613345.1_ASM161334v1

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Seq: BDCE01000057.1 Nocardia uniformis NBRC 13702 DNA, contig: NU1_CON01101, strain: NBRC 13702, whole genome shotgun sequence (251739 bp)
Overview 1 RT 1: 53299-58436 bp Neighborhood of RT #1 [53299, 58720] HTH_31 DUF397 RVT-GII group_II_RT_mat YjbM PS_pyruv_trans Feature: gene Location: 53299-54189 bp Feature: domain Description: HTH_31 Location: 53344-53527 bp Feature: domain Description: HTH_31 Location: 53344-53527 bp Feature: gene Location: 54186-54392 bp Feature: domain Description: DUF397 Location: 54210-54366 bp Feature: domain Description: DUF397 Location: 5421 0-54366 bp Feature: gene Location: 55008-56345 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55329-56001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 55329-56001 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 56046-56190 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 56046-561 90 bp Feature: gene Location: 56573-57331 bp Feature: domain Description: YjbM Location: 56666-57269 bp Feature: domain Description: YjbM Location: 56666-57269 bp Feature: gene Location: 57503-58720 bp Feature: domain Description: PS_pyruv_trans Location: 57554-58436 bp Feature: domain Description: PS_pyruv_trans Location: 57554-58436 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_31 (pfam13560), DUF397 (pfam04149), RVT-GII, group_II_RT_mat (TIGR04416), YjbM (COG2357), PS_pyruv_trans (pfam04230)