myRT

myRT report for GCA_001614535.1_ASM161453v1

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Seq: LVLR01000219.1 Escherichia coli strain cattle8 cattle8_contig_299, whole genome shotgun sequence (14865 bp)
Overview 1 RT 1: 4374-7263 bp Neighborhood of RT #1 [4374, 7263] RVT-GII GIIM RVT-GII Feature: gene Location: 4374-4592 bp Feature: gene Location: 4635-4805 bp Feature: gene Location: 4968-5621 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4971-5379 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4971 -5379 bp Feature: domain Description: GIIM Note: maturase Location: 5427-5619 bp Feature: domain Description: GIIM Note: maturase Location: 5427-561 9 bp Feature: gene Location: 5594-6028 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5786-6002 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5786-6002 bp Feature: gene Location: 6197-6394 bp Feature: gene Location: 6937-7263 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LVLR01000232.1 Escherichia coli strain cattle8 cattle8_contig_314, whole genome shotgun sequence (16127 bp)
Overview 1 RT 1: 10843-14266 bp Neighborhood of RT #1 [10843, 14307] PapB DDE_Tnp_IS66_C RVT-GII GIIM DDE_Tnp_IS66 Feature: gene Location: 10843-11124 bp Feature: domain Description: PapB Location: 10846-11116 bp Feature: domain Description: PapB Location: 10846-11116 bp Feature: gene Location: 11569-11715 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 11581-11692 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 11581-11692 bp Feature: gene Location: 11831-13063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12032-12686 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 032 -12 686 bp Feature: domain Description: GIIM Note: maturase Location: 12764-12986 bp Feature: domain Description: GIIM Note: maturase Location: 12 764-12 986 bp Feature: gene Location: 13156-13317 bp Feature: gene Location: 13525-14307 bp Feature: domain Description: DDE_Tnp_IS66 Location: 13531-14266 bp Feature: domain Description: DDE_Tnp_IS66 Location: 13531-142 66 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PapB (pfam03333), DDE_Tnp_IS66_C (pfam13817), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050)

Seq: LVLR01000045.1 Escherichia coli strain cattle8 cattle8_contig_65, whole genome shotgun sequence (1764 bp)
Overview 1 RT 1: 93-1371 bp Neighborhood of RT #1 [93, 1616] RVT-GII GIIM Feature: gene Location: 93-1616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 366-1098 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 66-1098 bp Feature: domain Description: GIIM Note: maturase Location: 1173-1371 bp Feature: domain Description: GIIM Note: maturase Location: 1173 -13 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)