myRT

myRT report for GCA_001614555.1_ASM161455v1

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Seq: LVPI01000028.1 Escherichia coli strain sheep13 sheep13_contig_34, whole genome shotgun sequence (13342 bp)
Overview 1 RT 1: 5850-9037 bp Neighborhood of RT #1 [5850, 9037] RVT-UG4 PRK10954 Feature: gene Location: 5850-6005 bp Feature: gene Location: 6261-6971 bp Feature: gene Location: 6982-7989 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 7339-7783 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 7339-7783 bp Feature: gene Location: 8193-8885 bp Feature: domain Description: PRK10954 Location: 8259-8826 bp Feature: domain Description: PRK1 0954 Location: 8259-8826 bp Feature: gene Location: 8891-9037 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, PRK10954 (thiol:disulfide interchange protein DsbA)

Seq: LVPI01000067.1 Escherichia coli strain sheep13 sheep13_contig_84, whole genome shotgun sequence (358322 bp)
Overview 1 RT 1: 294384-301073 bp Neighborhood of RT #1 [294384, 301195] XdhC PBP2_CrgA_like_5 RVT-Retrons DUF4145 Feature: gene Location: 294384-295340 bp Feature: domain Description: XdhC Location: 294462-295317 bp Feature: domain Description: XdhC Location: 2 94462 -2 95317 bp Feature: gene Location: 295319-295729 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 295391-295703 bp Feature: domain Description: PBP2 _CrgA_like_5 Location: 2 95391-2 95703 bp Feature: gene Location: 297025-297924 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 297040-297469 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 97040-2 97469 bp Feature: gene Location: 299268-299648 bp Feature: gene Location: 300311-301195 bp Feature: domain Description: DUF4145 Location: 300767-301073 bp Feature: domain Description: DUF4145 Location: 300767-301073 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XdhC (COG1975), PBP2_CrgA_like_5 (cd08474), RVT-Retrons, DUF4145 (pfam13643)