myRT

myRT report for GCA_001614955.1_ASM161495v1

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Seq: LVMH01000291.1 Escherichia coli strain swine5 swine5_contig_445, whole genome shotgun sequence (7359 bp)
Overview 1 RT 1: 4251-7291 bp Neighborhood of RT #1 [4251, 7356] PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 4251-4421 bp Feature: gene Location: 4449-4865 bp Feature: domain Description: PHA02517 Location: 4452-4857 bp Feature: domain Description: PHA0251 7 Location: 4452-4857 bp Feature: gene Location: 4988-6511 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5261-5993 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5261 -5993 bp Feature: domain Description: GIIM Note: maturase Location: 6068-6266 bp Feature: domain Description: GIIM Note: maturase Location: 6068-6266 bp Feature: gene Location: 6805-7086 bp Feature: gene Location: 7216-7356 bp Feature: domain Description: PHA02517 Location: 7219-7291 bp Feature: domain Description: PHA0251 7 Location: 721 9-7291 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: LVMH01000359.1 Escherichia coli strain swine5 swine5_contig_574, whole genome shotgun sequence (10549 bp)
Overview 1 RT 1: 5157-8751 bp Neighborhood of RT #1 [5157, 8751] Peptidase_S74 RVT-UG17 SLATT_5 Feature: gene Location: 5157-6197 bp Feature: domain Description: Peptidase_S74 Location: 5838-5985 bp Feature: domain Description: Peptidase_S74 Location: 5838-5985 bp Feature: gene Location: 6240-6527 bp Feature: gene Location: 6635-8005 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6863-7469 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 6863-7469 bp Feature: gene Location: 7983-8534 bp Feature: domain Description: SLATT_5 Location: 7989-8505 bp Feature: domain Description: SLATT_5 Location: 7989-8505 bp Feature: gene Location: 8572-8751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_S74 (pfam13884), RVT-UG17, SLATT_5 (pfam18160)