myRT

myRT report for GCA_001615545.1_ASM161554v1

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Seq: LVND01000305.1 Escherichia coli strain swine27 swine27_contig_366, whole genome shotgun sequence (13634 bp)
Overview 1 RT 1: 224-3549 bp Neighborhood of RT #1 [224, 3549] PHA02517 PHA02517 RVT-GII GIIM PHA02517 Feature: gene Location: 224-697 bp Feature: domain Description: PHA02517 Location: 248-464 bp Feature: domain Description: PHA0251 7 Location: 248-464 bp Feature: domain Description: PHA02517 Location: 470-632 bp Feature: domain Description: PHA0251 7 Location: 470-632 bp Feature: gene Location: 1289-2812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1562-2294 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 562-2294 bp Feature: domain Description: GIIM Note: maturase Location: 2369-2567 bp Feature: domain Description: GIIM Note: maturase Location: 2369-2567 bp Feature: gene Location: 2935-3351 bp Feature: domain Description: PHA02517 Location: 2938-3343 bp Feature: domain Description: PHA0251 7 Location: 2938-3343 bp Feature: gene Location: 3379-3549 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), RVT-GII, GIIM (pfam08388)

Seq: LVND01000393.1 Escherichia coli strain swine27 swine27_contig_512, whole genome shotgun sequence (59556 bp)
Overview 1 RT 1: 50870-54188 bp Neighborhood of RT #1 [50870, 54400] SLATT_5 RVT-UG17 Peptidase_S74 Feature: gene Location: 50870-51010 bp Feature: gene Location: 51023-51574 bp Feature: domain Description: SLATT_5 Location: 51029-51545 bp Feature: domain Description: SLATT_5 Location: 5102 9-51545 bp Feature: gene Location: 51552-52922 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 51780-52386 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 51780-52 386 bp Feature: gene Location: 53030-53323 bp Feature: gene Location: 53360-54400 bp Feature: domain Description: Peptidase_S74 Location: 54041-54188 bp Feature: domain Description: Peptidase_S74 Location: 54041-54188 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Peptidase_S74 (pfam13884)