myRT

myRT report for GCA_001616435.1_ASM161643v1

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Seq: LVPK01000029.1 Escherichia coli strain sheep15 sheep15_contig_32, whole genome shotgun sequence (13554 bp)
Overview 1 RT 1: 5874-9061 bp Neighborhood of RT #1 [5874, 9061] RVT-UG4 PRK10954 Feature: gene Location: 5874-6029 bp Feature: gene Location: 6285-6995 bp Feature: gene Location: 7006-8013 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 7363-7807 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 7363-7807 bp Feature: gene Location: 8217-8909 bp Feature: domain Description: PRK10954 Location: 8283-8850 bp Feature: domain Description: PRK1 0954 Location: 8283-8850 bp Feature: gene Location: 8915-9061 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG4, PRK10954 (thiol:disulfide interchange protein DsbA)

Seq: LVPK01000069.1 Escherichia coli strain sheep15 sheep15_contig_84, whole genome shotgun sequence (195873 bp)
Overview 1 RT 1: 126416-133105 bp Neighborhood of RT #1 [126416, 133227] XdhC PBP2_CrgA_like_5 RVT-Retrons DUF4145 Feature: gene Location: 126416-127372 bp Feature: domain Description: XdhC Location: 126494-127349 bp Feature: domain Description: XdhC Location: 12 6494-12 7349 bp Feature: gene Location: 127351-127761 bp Feature: domain Description: PBP2_CrgA_like_5 Location: 127423-127735 bp Feature: domain Description: PBP2 _CrgA_like_5 Location: 12 742 3-12 7735 bp Feature: gene Location: 129057-129956 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 129072-129501 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 12 9072 -12 9501 bp Feature: gene Location: 131300-131680 bp Feature: gene Location: 132343-133227 bp Feature: domain Description: DUF4145 Location: 132799-133105 bp Feature: domain Description: DUF4145 Location: 132 799-133105 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT XdhC (COG1975), PBP2_CrgA_like_5 (cd08474), RVT-Retrons, DUF4145 (pfam13643)