myRT

myRT report for GCA_001617225.1_ASM161722v1

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Seq: LVQY01000183.1 Escherichia coli strain sheep55 sheep55_contig_251, whole genome shotgun sequence (41050 bp)
Overview 1 RT 1: 36501-40383 bp Neighborhood of RT #1 [36501, 40388] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 36501-37217 bp Feature: domain Description: rph Location: 36504-37212 bp Feature: domain Description: rph Location: 36504-3721 2 bp Feature: gene Location: 37268-37924 bp Feature: domain Description: pyrE Location: 37286-37919 bp Feature: domain Description: pyrE Location: 37286-3791 9 bp Feature: gene Location: 38222-39181 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38357-38906 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 38357-38906 bp Feature: gene Location: 39227-39823 bp Feature: domain Description: slmA Location: 39233-39809 bp Feature: domain Description: slmA Location: 39233-39809 bp Feature: gene Location: 39930-40388 bp Feature: domain Description: dut Location: 39936-40383 bp Feature: domain Description: dut Location: 39936-40383 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: LVQY01000044.1 Escherichia coli strain sheep55 sheep55_contig_57, whole genome shotgun sequence (3462 bp)
Overview 1 RT 1: 3-3233 bp Neighborhood of RT #1 [3, 3460] SLATT_5 RVT-UG17 Peptidase_S74 Feature: gene Location: 3-209 bp Feature: gene Location: 320-871 bp Feature: domain Description: SLATT_5 Location: 326-842 bp Feature: domain Description: SLATT_5 Location: 32 6-842 bp Feature: gene Location: 849-2219 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1077-1683 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1077-1683 bp Feature: gene Location: 2300-2632 bp Feature: gene Location: 2657-3460 bp Feature: domain Description: Peptidase_S74 Location: 3086-3233 bp Feature: domain Description: Peptidase_S74 Location: 3086-32 33 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SLATT_5 (pfam18160), RVT-UG17, Peptidase_S74 (pfam13884)