myRT

myRT report for GCA_001619285.1_ASM161928v1

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Seq: LJJZ01000029.1 Bacillus cereus strain B4081 scaffold22, whole genome shotgun sequence (73982 bp)
Overview 1 RT 1: 9421-13767 bp 2 RT 2: 40544-45191 bp Neighborhood of RT #1 [9421, 13767] RVT_N RVT-GII GIIM nuc_hydro Neighborhood of RT #2 [40544, 45298] RVT-GII HNHc E1_enzyme_family PRTRC_A Feature: gene Location: 9421-9648 bp Feature: gene Location: 9814-10056 bp Feature: gene Location: 10257-11903 bp Feature: RT Description: RVT_N Location: 10299-10536 bp Feature: RT Description: RVT_N Location: 1 0299-1 0536 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10590-11250 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 0590-1 1 250 bp Feature: domain Description: GIIM Note: maturase Location: 11319-11550 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 31 9-1 1 550 bp Feature: gene Location: 12623-13573 bp Feature: domain Description: nuc_hydro Location: 12638-13544 bp Feature: domain Description: nuc_hydro Location: 1 2638-1 3544 bp Feature: gene Location: 13654-13767 bp Feature: gene Location: 40544-40672 bp Feature: gene Location: 40734-41237 bp Feature: gene Location: 41325-43205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41655-42384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 655-42384 bp Feature: domain Description: HNHc Note: nucleases Location: 42942-43092 bp Feature: domain Description: HNHc Note: nucleases Location: 42942-43092 bp Feature: gene Location: 43905-44306 bp Feature: domain Description: E1_enzyme_family Location: 43953-44289 bp Feature: domain Description: E1 _enzyme_family Location: 43953-44289 bp Feature: gene Location: 44303-45298 bp Feature: domain Description: PRTRC_A Location: 44837-45191 bp Feature: domain Description: PRTRC_A Location: 44837-451 91 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), nuc_hydro (cl00226), HNHc (smart00507), E1_enzyme_family (cl22428), PRTRC_A (TIGR03735)

Seq: LJJZ01000033.1 Bacillus cereus strain B4081 scaffold9, whole genome shotgun sequence (578873 bp)
Overview 1 RT 1: 535022-541519 bp 2 RT 2: 556512-564455 bp 3 RT 3: 572772-578843 bp Neighborhood of RT #1 [535022, 541519] AAA_10 RVT-GII HNHc TraC-F-type AAA_10 Neighborhood of RT #2 [556512, 565186] xerC TraG-D_C RVT-GII Intron_maturas2 HNHc Replic_Relax Neighborhood of RT #3 [572772, 578851] RVT-GII GIIM HNHc DUF3854 PCYCGC Feature: gene Location: 535022-535504 bp Feature: gene Location: 535506-536384 bp Feature: domain Description: AAA_10 Location: 535512-536268 bp Feature: domain Description: AAA_10 Location: 535512 -5362 68 bp Feature: gene Location: 536642-538474 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 536942-537647 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 536942 -537647 bp Feature: domain Description: HNHc Note: nucleases Location: 538226-538358 bp Feature: domain Description: HNHc Note: nucleases Location: 5382 2 6-538358 bp Feature: gene Location: 539190-540725 bp Feature: domain Description: TraC-F-type Location: 539880-540378 bp Feature: domain Description: TraC-F-type Location: 539880-540378 bp Feature: domain Description: AAA_10 Location: 540531-540708 bp Feature: domain Description: AAA_10 Location: 540531-540708 bp Feature: gene Location: 541229-541519 bp Feature: gene Location: 556512-557477 bp Feature: domain Description: xerC Location: 556530-557379 bp Feature: domain Description: xerC Location: 556530-557379 bp Feature: gene Location: 558044-559441 bp Feature: domain Description: TraG-D_C Location: 558188-558551 bp Feature: domain Description: TraG-D_C Location: 558188-558551 bp Feature: gene Location: 559545-561362 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 559809-560640 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 559809-560640 bp Feature: domain Description: Intron_maturas2 Location: 560718-561012 bp Feature: domain Description: Intron_maturas2 Location: 560718-561012 bp Feature: domain Description: HNHc Note: nucleases Location: 561159-561336 bp Feature: domain Description: HNHc Note: nucleases Location: 561159-561336 bp Feature: gene Location: 561976-563265 bp Feature: gene Location: 563636-565186 bp Feature: domain Description: Replic_Relax Location: 563732-564455 bp Feature: domain Description: Replic_Relax Location: 563732 -564455 bp Feature: gene Location: 572772-574322 bp Feature: gene Location: 574498-574641 bp Feature: gene Location: 575310-577205 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 575676-576375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 575676-576375 bp Feature: domain Description: GIIM Note: maturase Location: 576459-576702 bp Feature: domain Description: GIIM Note: maturase Location: 576459-576702 bp Feature: domain Description: HNHc Note: nucleases Location: 576948-577086 bp Feature: domain Description: HNHc Note: nucleases Location: 576948-577086 bp Feature: gene Location: 577297-578481 bp Feature: domain Description: DUF3854 Location: 578128-578449 bp Feature: domain Description: DUF3854 Location: 57812 8-578449 bp Feature: gene Location: 578702-578851 bp Feature: domain Description: PCYCGC Location: 578714-578843 bp Feature: domain Description: PCYCGC Location: 578714-578843 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_10 (pfam12846), RVT-GII, HNHc (smart00507), TraC-F-type (TIGR02746), xerC (PRK01287), TraG-D_C (pfam12696), Intron_maturas2 (pfam01348), Replic_Relax (pfam13814), GIIM (pfam08388), DUF3854 (pfam12965)
PCYCGC (pfam13798)