myRT

myRT report for GCA_001619355.1_ASM161935v1

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Seq: LJKE01000007.1 Bacillus cereus strain B4088 scaffold56, whole genome shotgun sequence (25361 bp)
Overview 1 RT 1: 5471-10280 bp 2 RT 2: 14806-24165 bp Neighborhood of RT #1 [5471, 10285] COG4712 RVT-GII beta_clamp Neighborhood of RT #2 [14806, 24692] E1_enzyme_family RVT-GII Intron_maturas2 HNHc PRTRC_ThiF NT_KNTase_like RVT-GII PRK06850 Feature: gene Location: 5471-5827 bp Feature: domain Description: COG4712 Location: 5480-5822 bp Feature: domain Description: COG471 2 Location: 5480-5822 bp Feature: gene Location: 6251-6391 bp Feature: gene Location: 6526-8487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6904-7606 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6904-7606 bp Feature: gene Location: 8700-9092 bp Feature: gene Location: 9173-10285 bp Feature: domain Description: beta_clamp Location: 9176-10280 bp Feature: domain Description: beta_clamp Location: 91 76-1 0280 bp Feature: gene Location: 14806-15207 bp Feature: gene Location: 15220-15402 bp Feature: domain Description: E1_enzyme_family Location: 15268-15388 bp Feature: domain Description: E1 _enzyme_family Location: 1 5268-1 5388 bp Feature: gene Location: 16028-17911 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16301-17138 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6301 -1 71 38 bp Feature: domain Description: Intron_maturas2 Location: 17276-17567 bp Feature: domain Description: Intron_maturas2 Location: 1 7276-1 7567 bp Feature: domain Description: HNHc Note: nucleases Location: 17699-17858 bp Feature: domain Description: HNHc Note: nucleases Location: 1 7699-1 7858 bp Feature: gene Location: 18163-18705 bp Feature: domain Description: PRTRC_ThiF Location: 18226-18685 bp Feature: domain Description: PRTRC_ThiF Location: 1 8226-1 8685 bp Feature: gene Location: 18725-19096 bp Feature: gene Location: 19118-19516 bp Feature: domain Description: NT_KNTase_like Location: 19199-19493 bp Feature: domain Description: NT_KNTase_like Location: 1 91 99-1 9493 bp Feature: gene Location: 20275-22206 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20596-21331 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20596-21 331 bp Feature: gene Location: 22619-22795 bp Feature: gene Location: 22920-24692 bp Feature: domain Description: PRK06850 Location: 22935-24165 bp Feature: domain Description: PRK06850 Location: 22935-241 65 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4712 (Uncharacterized protein ), RVT-GII, beta_clamp (cl29549), E1_enzyme_family (cl22428), Intron_maturas2 (pfam01348), HNHc (smart00507), PRTRC_ThiF (TIGR03736), NT_KNTase_like (cd05403), PRK06850 (hypothetical protein; Provisional)

Seq: LJKE01000010.1 Bacillus cereus strain B4088 scaffold42, whole genome shotgun sequence (55183 bp)
Overview 1 RT 1: 32835-39055 bp Neighborhood of RT #1 [32835, 39055] LPD1 RVT-GII HNHc DUF3854 Feature: gene Location: 32835-34610 bp Feature: domain Description: LPD1 Location: 34359-34554 bp Feature: domain Description: LPD1 Location: 34359-34554 bp Feature: gene Location: 34600-35130 bp Feature: gene Location: 35866-37749 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36187-36925 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36187-3692 5 bp Feature: domain Description: HNHc Note: nucleases Location: 37483-37630 bp Feature: domain Description: HNHc Note: nucleases Location: 37483-37630 bp Feature: gene Location: 37851-38756 bp Feature: domain Description: DUF3854 Location: 38373-38727 bp Feature: domain Description: DUF3854 Location: 38373-3872 7 bp Feature: gene Location: 38894-39055 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LPD1 (pfam18796), RVT-GII, HNHc (smart00507), DUF3854 (pfam12965)

Seq: LJKE01000073.1 Bacillus cereus strain B4088 scaffold113, whole genome shotgun sequence (2373 bp)
Overview 1 RT 1: 619-1912 bp Neighborhood of RT #1 [619, 2265] RVT_N RVT-GII GIIM Feature: gene Location: 619-2265 bp Feature: RT Description: RVT_N Location: 661-898 bp Feature: RT Description: RVT_N Location: 661-898 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 952-1612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 952-1612 bp Feature: domain Description: GIIM Note: maturase Location: 1681-1912 bp Feature: domain Description: GIIM Note: maturase Location: 1681-1912 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: LJKE01000106.1 Bacillus cereus strain B4088 scaffold43, whole genome shotgun sequence (41822 bp)
Overview 1 RT 1: 23206-28311 bp Neighborhood of RT #1 [23206, 28311] rve Tn7_Tnp_TnsA_C RVT-GII Intron_maturas2 HNHc Tn7_Tnp_TnsA_N Feature: gene Location: 23206-24690 bp Feature: domain Description: rve Location: 24046-24460 bp Feature: domain Description: rve Location: 24 04 6-24 4 60 bp Feature: gene Location: 24687-24968 bp Feature: domain Description: Tn7_Tnp_TnsA_C Location: 24711-24888 bp Feature: domain Description: Tn7_Tnp_TnsA_C Location: 24 711-24 888 bp Feature: gene Location: 25586-27403 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25850-26681 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25850-26681 bp Feature: domain Description: Intron_maturas2 Location: 26759-27053 bp Feature: domain Description: Intron_maturas2 Location: 26759-27053 bp Feature: domain Description: HNHc Note: nucleases Location: 27200-27377 bp Feature: domain Description: HNHc Note: nucleases Location: 27200-27377 bp Feature: gene Location: 27469-28074 bp Feature: domain Description: Tn7_Tnp_TnsA_N Location: 27688-27967 bp Feature: domain Description: Tn7_Tnp_TnsA_N Location: 27688-27967 bp Feature: gene Location: 28186-28311 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rve (pfam00665), Tn7_Tnp_TnsA_C (pfam08721), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), Tn7_Tnp_TnsA_N (pfam08722)