myRT

myRT report for GCA_001619405.1_ASM161940v1

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Seq: LJKJ01000067.1 Bacillus cereus strain B4155 scaffold20, whole genome shotgun sequence (201751 bp)
Overview 1 RT 1: 82443-89271 bp 2 RT 2: 149267-154332 bp 3 RT 3: 178019-187905 bp 4 RT 4: 190248-195057 bp Neighborhood of RT #1 [82443, 89271] RVT_N RVT-GII GIIM HNH DEXHc_Snf DEXHc_Snf Neighborhood of RT #2 [149267, 154332] rve Tn7_Tnp_TnsA_C RVT-GII Intron_maturas2 HNHc Tn7_Tnp_TnsA_N Neighborhood of RT #3 [178019, 187905] PRK06850 RVT-GII NT_KNTase_like PRTRC_ThiF RVT-GII Intron_maturas2 HNHc E1_enzyme_family Neighborhood of RT #4 [190248, 195062] beta_clamp RVT-GII COG4712 Feature: gene Location: 82443-83156 bp Feature: gene Location: 83173-83757 bp Feature: gene Location: 84003-85814 bp Feature: RT Description: RVT_N Location: 84057-84303 bp Feature: RT Description: RVT_N Location: 84057-84303 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84357-85011 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84357-8501 1 bp Feature: domain Description: GIIM Note: maturase Location: 85074-85308 bp Feature: domain Description: GIIM Note: maturase Location: 85074-85308 bp Feature: domain Description: HNH Note: nucleases Location: 85548-85683 bp Feature: domain Description: HNH Note: nucleases Location: 85548-85683 bp Feature: gene Location: 86386-88971 bp Feature: domain Description: DEXHc_Snf Location: 87172-87535 bp Feature: domain Description: DEXHc_Snf Location: 871 72-87535 bp Feature: domain Description: DEXHc_Snf Location: 87901-88174 bp Feature: domain Description: DEXHc_Snf Location: 87901 -881 74 bp Feature: gene Location: 89044-89271 bp Feature: gene Location: 149267-150751 bp Feature: domain Description: rve Location: 150107-150521 bp Feature: domain Description: rve Location: 1 501 07-1 50521 bp Feature: gene Location: 150748-151029 bp Feature: domain Description: Tn7_Tnp_TnsA_C Location: 150772-150949 bp Feature: domain Description: Tn7_Tnp_TnsA_C Location: 1 50772-1 50949 bp Feature: gene Location: 151647-153464 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 151911-152742 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 51 91 1 -1 52742 bp Feature: domain Description: Intron_maturas2 Location: 152820-153114 bp Feature: domain Description: Intron_maturas2 Location: 1 52820-1 531 1 4 bp Feature: domain Description: HNHc Note: nucleases Location: 153261-153438 bp Feature: domain Description: HNHc Note: nucleases Location: 1 53261 -1 53438 bp Feature: gene Location: 153530-154135 bp Feature: domain Description: Tn7_Tnp_TnsA_N Location: 153749-154028 bp Feature: domain Description: Tn7_Tnp_TnsA_N Location: 1 53749-1 54028 bp Feature: gene Location: 154207-154332 bp Feature: gene Location: 178019-179791 bp Feature: domain Description: PRK06850 Location: 178034-179264 bp Feature: domain Description: PRK06850 Location: 1 78034-1 79264 bp Feature: gene Location: 179916-180092 bp Feature: gene Location: 180505-182436 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 180826-181561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 80826-1 81 561 bp Feature: gene Location: 183195-183593 bp Feature: domain Description: NT_KNTase_like Location: 183276-183570 bp Feature: domain Description: NT_KNTase_like Location: 1 83276-1 83570 bp Feature: gene Location: 183615-183986 bp Feature: gene Location: 184006-184548 bp Feature: domain Description: PRTRC_ThiF Location: 184069-184528 bp Feature: domain Description: PRTRC_ThiF Location: 1 84069-1 84528 bp Feature: gene Location: 184800-186683 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 185073-185910 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 85073-1 8591 0 bp Feature: domain Description: Intron_maturas2 Location: 186048-186339 bp Feature: domain Description: Intron_maturas2 Location: 1 86048-1 86339 bp Feature: domain Description: HNHc Note: nucleases Location: 186471-186630 bp Feature: domain Description: HNHc Note: nucleases Location: 1 86471 -1 86630 bp Feature: gene Location: 187309-187491 bp Feature: domain Description: E1_enzyme_family Location: 187357-187477 bp Feature: domain Description: E1 _enzyme_family Location: 1 87357-1 87477 bp Feature: gene Location: 187504-187905 bp Feature: gene Location: 190248-191360 bp Feature: domain Description: beta_clamp Location: 190251-191355 bp Feature: domain Description: beta_clamp Location: 1 90251 -1 91 355 bp Feature: gene Location: 191441-191968 bp Feature: gene Location: 192046-193944 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 192361-193063 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 92361 -1 93063 bp Feature: gene Location: 194142-194282 bp Feature: gene Location: 194706-195062 bp Feature: domain Description: COG4712 Location: 194715-195057 bp Feature: domain Description: COG471 2 Location: 1 9471 5-1 95057 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), DEXHc_Snf (cd17919), rve (pfam00665), Tn7_Tnp_TnsA_C (pfam08721), Intron_maturas2 (pfam01348), HNHc (smart00507), Tn7_Tnp_TnsA_N (pfam08722)
PRK06850 (hypothetical protein; Provisional), NT_KNTase_like (cd05403), PRTRC_ThiF (TIGR03736), E1_enzyme_family (cl22428), beta_clamp (cl29549), COG4712 (Uncharacterized protein )

Seq: LJKJ01000011.1 Bacillus cereus strain B4155 scaffold56, whole genome shotgun sequence (2685 bp)
Overview 1 RT 1: 117-1833 bp Neighborhood of RT #1 [117, 1949] RVT-GII HNHc Feature: gene Location: 117-1949 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 417-1122 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 417-112 2 bp Feature: domain Description: HNHc Note: nucleases Location: 1701-1833 bp Feature: domain Description: HNHc Note: nucleases Location: 1701-1833 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, HNHc (smart00507)

Seq: LJKJ01000004.1 Bacillus cereus strain B4155 scaffold58, whole genome shotgun sequence (2369 bp)
Overview 1 RT 1: 615-1908 bp Neighborhood of RT #1 [615, 2261] RVT_N RVT-GII GIIM Feature: gene Location: 615-2261 bp Feature: RT Description: RVT_N Location: 657-894 bp Feature: RT Description: RVT_N Location: 657-894 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 948-1608 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 948-1608 bp Feature: domain Description: GIIM Note: maturase Location: 1677-1908 bp Feature: domain Description: GIIM Note: maturase Location: 1677-1908 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)