myRT

myRT report for GCA_001619795.1_ASM161979v1

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Seq: LQQZ01000021.1 Proteus mirabilis strain M16 contig_28, whole genome shotgun sequence (63789 bp)
Overview 1 RT 1: 6042-15664 bp Neighborhood of RT #1 [6042, 15672] RVT-UG5 nitrilase PRK09692 PRK10662 Feature: gene Location: 6042-7206 bp Feature: gene Location: 7786-8475 bp Feature: gene Location: 8472-11378 bp Ori: KZE58303.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 8946-9456 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 8946-9456 bp Feature: domain Description: nitrilase Location: 10860-11298 bp Feature: domain Description: nitrilase Location: 1 0860-1 1 298 bp Feature: gene Location: 11437-12711 bp Ori: KZE58304.1 Feature: domain Description: PRK09692 Location: 11446-12646 bp Feature: domain Description: PRK09692 Location: 1 1 446-1 2646 bp Feature: gene Location: 14398-15672 bp Ori: KZE58305.1 Feature: domain Description: PRK10662 Location: 14458-15664 bp Feature: domain Description: PRK1 0662 Location: 1 4458-1 5664 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, nitrilase (cl11424), PRK09692 (Integrase; provisional), PRK10662 (beta-lactam binding protein AmpH; Provisional)

Seq: LQQZ01000015.1 Proteus mirabilis strain M16 contig_22, whole genome shotgun sequence (229975 bp)
Overview 1 RT 1: 193362-199927 bp Neighborhood of RT #1 [193362, 199944] DAP2 RVT-Retrons PRK09678 AhpF Feature: gene Location: 193362-193844 bp Feature: gene Location: 194100-195092 bp Ori: KZE59076.1 Feature: domain Description: DAP2 Location: 194310-194865 bp Feature: domain Description: DAP2 Location: 194310-194865 bp Feature: gene Location: 195582-197339 bp Ori: KZE59077.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 195720-196344 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 19572 0-196344 bp Feature: gene Location: 197846-198064 bp Ori: KZE59078.1 Feature: domain Description: PRK09678 Location: 197849-198056 bp Feature: domain Description: PRK09678 Location: 197849-198056 bp Feature: gene Location: 198370-199944 bp Ori: KZE59079.1 Feature: domain Description: AhpF Location: 198373-199927 bp Feature: domain Description: AhpF Location: 198373-19992 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DAP2 (COG1506), RVT-Retrons, PRK09678 (DNA-binding transcriptional regulator; Provisional), AhpF (TIGR03140)

Seq: LQQZ01000034.1 Proteus mirabilis strain M16 contig_4, whole genome shotgun sequence (165802 bp)
Overview 1 RT 1: 66934-74131 bp Neighborhood of RT #1 [66934, 74139] YqiC ABC_ATPase ABC_ATPase RVT-Retrons PRK11316 PRK11072 Feature: gene Location: 66934-67248 bp Ori: KZE57048.1 Feature: domain Description: YqiC Location: 66937-67189 bp Feature: domain Description: YqiC Location: 6693 7-67189 bp Feature: gene Location: 67309-68616 bp Ori: KZE57049.1 Feature: domain Description: ABC_ATPase Location: 67357-67456 bp Feature: domain Description: ABC_ATPase Location: 673 57-67456 bp Feature: domain Description: ABC_ATPase Location: 67846-68038 bp Feature: domain Description: ABC_ATPase Location: 67846-6803 8 bp Feature: gene Location: 68616-69569 bp Ori: KZE57050.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 68739-69297 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 6873 9-69297 bp Feature: gene Location: 69780-71204 bp Ori: KZE57051.1 Feature: domain Description: PRK11316 Location: 69783-71199 bp Feature: domain Description: PRK113 16 Location: 69783 -71199 bp Feature: gene Location: 71305-74139 bp Ori: KZE57052.1 Feature: domain Description: PRK11072 Location: 71320-74131 bp Feature: domain Description: PRK11072 Location: 713 20-7413 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YqiC (COG2960), ABC_ATPase (pfam09818), RVT-Retrons, PRK11316 (bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE), PRK11072 (bifunctional adenylyltransferase)