myRT

myRT report for GCA_001620985.1_ASM162098v1

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Seq: LVRG01000090.1 Escherichia coli strain GN04499 GCID_ECOLID_00187_NODE_18.ctg_1, whole genome shotgun sequence (58682 bp)
Overview 1 RT 1: 12108-17207 bp Neighborhood of RT #1 [12108, 17908] PRK10870 PRK09692 RVT-Retrons ABC_ATPase Relaxase Feature: gene Location: 12108-12632 bp Feature: domain Description: PRK10870 Location: 12171-12624 bp Feature: domain Description: PRK1 0870 Location: 1 21 71 -1 2624 bp Feature: gene Location: 13067-13405 bp Feature: domain Description: PRK09692 Location: 13076-13397 bp Feature: domain Description: PRK09692 Location: 1 3076-1 3397 bp Feature: gene Location: 14032-14982 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14179-14707 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 41 79-1 4707 bp Feature: gene Location: 14979-16343 bp Feature: domain Description: ABC_ATPase Location: 15027-15735 bp Feature: domain Description: ABC_ATPase Location: 1 5027-1 5735 bp Feature: gene Location: 16448-17908 bp Feature: domain Description: Relaxase Location: 16475-17207 bp Feature: domain Description: Relaxase Location: 1 6475-1 7207 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10870 (transcriptional repressor MprA; Provisional), PRK09692 (Integrase; provisional), RVT-Retrons, ABC_ATPase (pfam09818), Relaxase (pfam03432)