myRT

myRT report for GCA_001621905.2_ASM162190v2

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Seq: LVTB02000001.1 Escherichia coli strain GN06007 000000F_arrow, whole genome shotgun sequence (5215159 bp)
Overview 1 RT 1: 563558-569056 bp 2 RT 2: 2713095-2719046 bp Neighborhood of RT #1 [563558, 569154] YhhI YhhI YhhI RVT-GII GIIM YhhI YhhI YhhI YhhI Neighborhood of RT #2 [2713095, 2719222] AAA_15 RVT-Retrons Nuc_deoxyrib_tr Feature: gene Location: 563558-564520 bp Feature: gene Location: 564833-565789 bp Feature: domain Description: YhhI Location: 564836-565181 bp Feature: domain Description: YhhI Location: 564836-5651 81 bp Feature: domain Description: YhhI Location: 565238-565592 bp Feature: domain Description: YhhI Location: 565238-565592 bp Feature: domain Description: YhhI Location: 565592-565772 bp Feature: domain Description: YhhI Location: 565592-565772 bp Feature: gene Location: 566321-567571 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 566525-567182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 566525-5671 82 bp Feature: domain Description: GIIM Note: maturase Location: 567263-567485 bp Feature: domain Description: GIIM Note: maturase Location: 567263-567485 bp Feature: gene Location: 567648-567842 bp Feature: domain Description: YhhI Location: 567657-567828 bp Feature: domain Description: YhhI Location: 567657-567828 bp Feature: gene Location: 568018-569154 bp Feature: domain Description: YhhI Location: 568021-568384 bp Feature: domain Description: YhhI Location: 568021 -568384 bp Feature: domain Description: YhhI Location: 568441-568795 bp Feature: domain Description: YhhI Location: 568441 -568795 bp Feature: domain Description: YhhI Location: 568813-569056 bp Feature: domain Description: YhhI Location: 56881 3-569056 bp Feature: gene Location: 2713095-2713325 bp Feature: gene Location: 2714238-2716484 bp Feature: domain Description: AAA_15 Location: 2714241-2715249 bp Feature: domain Description: AAA_1 5 Location: 271 4241 -271 5249 bp Feature: gene Location: 2716599-2717697 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2716782-2717310 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 271 6782-271 731 0 bp Feature: gene Location: 2718178-2718333 bp Feature: gene Location: 2718353-2719222 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 2718875-2719046 bp Feature: domain Description: Nuc_deoxyrib_tr Location: 271 8875-271 9046 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YhhI (COG5433), RVT-GII, GIIM (pfam08388), AAA_15 (pfam13175), RVT-Retrons, Nuc_deoxyrib_tr (pfam05014)