myRT

myRT report for GCA_001622135.1_ASM162213v1

Download annotations/find similar RTs

Seq: LVTM01000460.1 Escherichia coli strain GN06186 GCID_ECOLID_00250_NODE_762.ctg_1, whole genome shotgun sequence (1865 bp)
Overview 1 RT 1: 1-1794 bp Neighborhood of RT #1 [1, 1793] rph pyrE RVT-Retrons Feature: gene Location: 1-363 bp Feature: domain Description: rph Location: 4-358 bp Feature: domain Description: rph Location: 4-358 bp Feature: gene Location: 429-1070 bp Feature: domain Description: pyrE Location: 432-1065 bp Feature: domain Description: pyrE Location: 432-1 065 bp Feature: gene Location: 1368-1793 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1503-1794 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 503-1 794 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), RVT-Retrons, pyrE (TIGR00336)

Seq: LVTM01000240.1 Escherichia coli strain GN06186 GCID_ECOLID_00250_NODE_2492.ctg_1, whole genome shotgun sequence (734 bp)
Overview 1 RT 1: 73-499 bp Neighborhood of RT #1 [73, 498] RVT-Retrons Feature: gene Location: 73-498 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 208-499 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2 08-499 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: LVTM01000238.1 Escherichia coli strain GN06186 GCID_ECOLID_00250_NODE_249.ctg_1, whole genome shotgun sequence (5804 bp)
Overview 1 RT 1: 1-1193 bp Neighborhood of RT #1 [1, 1193] RVT-GII Feature: gene Location: 1-513 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259-514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 259-514 bp Feature: gene Location: 482-907 bp Feature: gene Location: 822-1193 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII