myRT

myRT report for GCA_001623485.1_ASM162348v1

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Seq: LWAJ01000184.1 Nodularia spumigena CENA596 scaffold266_cov655, whole genome shotgun sequence (14719 bp)
Overview 1 RT 1: 11294-14684 bp Neighborhood of RT #1 [11294, 14689] MPP_YkuE_C RVT-GII PLN02599 Feature: gene Location: 11294-11764 bp Feature: gene Location: 12024-12887 bp Feature: gene Location: 12966-13394 bp Feature: domain Description: MPP_YkuE_C Location: 13032-13191 bp Feature: domain Description: MPP_YkuE_C Location: 1 3032-1 31 91 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 13218-13392 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 321 8-1 3392 bp Feature: gene Location: 13661-14689 bp Feature: domain Description: PLN02599 Location: 13667-14684 bp Feature: domain Description: PLN02599 Location: 1 3667-1 4684 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MPP_YkuE_C (cd07385), RVT-GII, PLN02599 (dihydroorotase)

Seq: LWAJ01000284.1 Nodularia spumigena CENA596 scaffold93_cov647, whole genome shotgun sequence (69232 bp)
Overview 1 RT 1: 30-5703 bp Neighborhood of RT #1 [30, 5717] rimM AvtA RVT-DGRs Avd_like YfmG Feature: gene Location: 30-707 bp Feature: domain Description: rimM Location: 135-693 bp Feature: domain Description: rimM Location: 135-693 bp Feature: gene Location: 712-1995 bp Feature: domain Description: AvtA Location: 724-1981 bp Feature: domain Description: AvtA Location: 72 4-1981 bp Feature: gene Location: 2660-3718 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2855-3593 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 855-3593 bp Feature: gene Location: 3715-4062 bp Feature: domain Description: Avd_like Location: 3733-4039 bp Feature: domain Description: Avd_like Location: 3733-4039 bp Feature: gene Location: 4230-5717 bp Feature: domain Description: YfmG Location: 4671-5703 bp Feature: domain Description: YfmG Location: 4671-5703 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs, rimM (PRK14594), YfmG (COG1262), AvtA (COG3977)