myRT

myRT report for GCA_001623495.1_ASM162349v1

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Seq: LWHI01000001.1 Lysinibacillus sphaericus strain OT4b.49 contig_1, whole genome shotgun sequence (4624283 bp)
Overview 1 RT 1: 1362885-1368084 bp 2 RT 2: 2659979-2666831 bp Neighborhood of RT #1 [1362885, 1368107] YbbK RimL RVT-GII HNHc DUF2798 DUF2798 HxlR Neighborhood of RT #2 [2659979, 2666831] RVT-GII HNHc A3DFK9-like_SDR_c Feature: gene Location: 1362885-1363316 bp Feature: domain Description: YbbK Location: 1362888-1363311 bp Feature: domain Description: YbbK Location: 1 362888-1 36331 1 bp Feature: gene Location: 1363482-1364009 bp Feature: domain Description: RimL Location: 1363494-1364001 bp Feature: domain Description: RimL Location: 1 363494-1 364001 bp Feature: gene Location: 1364903-1366708 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1365200-1365899 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 365200-1 365899 bp Feature: domain Description: HNHc Note: nucleases Location: 1366457-1366595 bp Feature: domain Description: HNHc Note: nucleases Location: 1 366457-1 366595 bp Feature: gene Location: 1366869-1367360 bp Feature: domain Description: DUF2798 Location: 1366908-1367085 bp Feature: domain Description: DUF2798 Location: 1 366908-1 367085 bp Feature: domain Description: DUF2798 Location: 1367139-1367322 bp Feature: domain Description: DUF2798 Location: 1 3671 39-1 367322 bp Feature: gene Location: 1367739-1368107 bp Feature: domain Description: HxlR Location: 1367784-1368084 bp Feature: domain Description: HxlR Location: 1 367784-1 368084 bp Feature: gene Location: 2659979-2660659 bp Feature: gene Location: 2661050-2661352 bp Feature: gene Location: 2661962-2663767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2662259-2662958 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2662259-2662958 bp Feature: domain Description: HNHc Note: nucleases Location: 2663516-2663654 bp Feature: domain Description: HNHc Note: nucleases Location: 266351 6-2663654 bp Feature: gene Location: 2665342-2666088 bp Feature: domain Description: A3DFK9-like_SDR_c Location: 2665357-2666080 bp Feature: domain Description: A3DFK9-like_SDR_c Location: 2665357-2666080 bp Feature: gene Location: 2666181-2666831 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YbbK (COG1683), RimL (COG1670), RVT-GII, HNHc (smart00507), DUF2798 (pfam11391), HxlR (pfam01638), A3DFK9-like_SDR_c (cd09761)