myRT

myRT report for GCA_001625325.1_ASM162532v1

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Seq: JRQQ01000006.1 Altererythrobacter sp. MH-B5 contig6, whole genome shotgun sequence (339753 bp)
Overview 1 RT 1: 290878-295801 bp Neighborhood of RT #1 [290878, 295827] RVT-UG12 Arm-DNA-bind_3 INT_Rci_Hp1_C COG3547 Feature: gene Location: 290878-291060 bp Feature: gene Location: 291254-291457 bp Feature: gene Location: 291777-293438 bp Ori: OCC23714.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 292194-292644 bp Feature: RT Description: RVT-UG1 2 Note: UG1 2 RT Location: 2921 94-292644 bp Feature: gene Location: 293758-295323 bp Ori: OCC23715.1 Feature: domain Description: Arm-DNA-bind_3 Location: 293785-294058 bp Feature: domain Description: Arm-DNA-bind_3 Location: 293785-294058 bp Feature: domain Description: INT_Rci_Hp1_C Location: 294460-294949 bp Feature: domain Description: INT_Rci_Hp1 _C Location: 294460-294949 bp Feature: gene Location: 295495-295827 bp Ori: OCC23716.1 Feature: domain Description: COG3547 Location: 295576-295801 bp Feature: domain Description: COG3547 Location: 295576-295801 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG12, Arm-DNA-bind_3 (pfam13356), INT_Rci_Hp1_C (cd00796), COG3547 (Transposase )

Seq: JRQQ01000003.1 Altererythrobacter sp. MH-B5 contig3, whole genome shotgun sequence (306095 bp)
Overview 1 RT 1: 113100-120565 bp Neighborhood of RT #1 [113100, 120582] PRK09692 COG3666 DDE_Tnp_1_6 RVT-UG1 ALP_N-acyl_transferase excise COG5639 Feature: gene Location: 113100-114329 bp Ori: OCC24311.1 Feature: domain Description: PRK09692 Location: 113106-114282 bp Feature: domain Description: PRK09692 Location: 113106-1142 82 bp Feature: gene Location: 114485-115921 bp Ori: OCC24312.1 Feature: domain Description: COG3666 Location: 114497-114968 bp Feature: domain Description: COG3666 Location: 114497-114968 bp Feature: domain Description: DDE_Tnp_1_6 Location: 115529-115874 bp Feature: domain Description: DDE_Tnp_1_6 Location: 11552 9-115874 bp Feature: gene Location: 116184-119834 bp Ori: OCC24313.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 116721-117204 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 11672 1-1172 04 bp Feature: domain Description: ALP_N-acyl_transferase Location: 119073-119520 bp Feature: domain Description: ALP_N-acyl_transferase Location: 119073-11952 0 bp Feature: gene Location: 120167-120355 bp Ori: OCC24314.1 Feature: domain Description: excise Location: 120218-120338 bp Feature: domain Description: excise Location: 12 02 18-12 0338 bp Feature: gene Location: 120352-120582 bp Ori: OCC24315.1 Feature: domain Description: COG5639 Location: 120355-120565 bp Feature: domain Description: COG5639 Location: 12 0355-12 0565 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK09692 (Integrase; provisional), COG3666 (Transposase ), DDE_Tnp_1_6 (pfam13751), RVT-UG1, ALP_N-acyl_transferase (cd07571), excise (TIGR01764), COG5639 (Uncharacterized protein )