myRT

myRT report for GCA_001625685.1_ASM162568v1

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Seq: AUYC01000018.1 Pseudoalteromonas luteoviolacea CPMOR-1 contig_2, whole genome shotgun sequence (218185 bp)
Overview 1 RT 1: 190909-195339 bp Neighborhood of RT #1 [190909, 195371] Arm-DNA-bind_3 INT_P4_C RVT-Retrons XerC Feature: gene Location: 190909-192168 bp Ori: KZN65251.1 Feature: domain Description: Arm-DNA-bind_3 Location: 190933-191209 bp Feature: domain Description: Arm-DNA-bind_3 Location: 1 90933-1 91 209 bp Feature: domain Description: INT_P4_C Location: 191581-192148 bp Feature: domain Description: INT_P4_C Location: 1 91 581 -1 921 48 bp Feature: gene Location: 192266-192568 bp Feature: gene Location: 192569-193774 bp Ori: KZN65253.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 192719-193292 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 9271 9-1 93292 bp Feature: gene Location: 193774-194502 bp Feature: gene Location: 194493-195371 bp Ori: KZN65255.1 Feature: domain Description: XerC Location: 194580-195339 bp Feature: domain Description: XerC Location: 1 94580-1 95339 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arm-DNA-bind_3 (pfam13356), INT_P4_C (cd00801), RVT-Retrons, XerC (COG4973)

Seq: AUYC01000073.1 Pseudoalteromonas luteoviolacea CPMOR-1 contig_7, whole genome shotgun sequence (166488 bp)
Overview 1 RT 1: 147678-149960 bp Neighborhood of RT #1 [147678, 149960] HTH_XRE RVT-Retrons Feature: gene Location: 147678-147929 bp Feature: gene Location: 147997-148242 bp Ori: KZN58740.1 Feature: domain Description: HTH_XRE Location: 148000-148132 bp Feature: domain Description: HTH_XRE Location: 148000-148132 bp Feature: gene Location: 148280-149188 bp Ori: KZN58741.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 148361-148922 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 148361-14892 2 bp Feature: gene Location: 149444-149632 bp Feature: gene Location: 149838-149960 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons