myRT

myRT report for GCA_001630695.1_ASM163069v1

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Seq: LFUT01000002.1 Pseudomonas chlororaphis subsp. piscium strain PCL1391 PCL1391_contig_2, whole genome shotgun sequence (331043 bp)
Overview 1 RT 1: 223259-230774 bp Neighborhood of RT #1 [223259, 230932] Arabinose_bd AraC RVT-Retrons AAA_15 TOPRIM_OLD Integrase_1 Feature: gene Location: 223259-224275 bp Ori: KZO51713.1 Feature: domain Description: Arabinose_bd Location: 223331-223874 bp Feature: domain Description: Arabinose_bd Location: 223331 -223874 bp Feature: domain Description: AraC Location: 223934-224225 bp Feature: domain Description: AraC Location: 223934-224225 bp Feature: gene Location: 225074-225928 bp Feature: gene Location: 226419-227372 bp Ori: KZO51715.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 226533-227067 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 226533-227067 bp Feature: gene Location: 227520-229346 bp Ori: KZO51716.1 Feature: domain Description: AAA_15 Location: 227523-228720 bp Feature: domain Description: AAA_1 5 Location: 227523-228720 bp Feature: domain Description: TOPRIM_OLD Location: 228891-229107 bp Feature: domain Description: TOPRIM_OLD Location: 228891 -2291 07 bp Feature: gene Location: 229952-230932 bp Ori: KZO51717.1 Feature: domain Description: Integrase_1 Location: 230339-230774 bp Feature: domain Description: Integrase_1 Location: 230339-230774 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Arabinose_bd (pfam12625), AraC (COG2207), RVT-Retrons, AAA_15 (pfam13175), TOPRIM_OLD (cd01026), Integrase_1 (pfam12835)