myRT

myRT report for GCA_001631445.1_ASM163144v1

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Seq: LVUF01000028.1 Enterobacter genomosp. O strain GN05526 GCID_ENTE_00274_NODE_13.ctg_1, whole genome shotgun sequence (97901 bp)
Overview 1 RT 1: 49400-55059 bp 2 RT 2: 81946-86630 bp Neighborhood of RT #1 [49400, 55151] PinE RVT-GII GIIM HTH_29 Fes Neighborhood of RT #2 [81946, 87028] FKBP_N RVT-GII GIIM PHA02517 CadC1 Feature: gene Location: 49400-49941 bp Feature: domain Description: PinE Location: 49403-49916 bp Feature: domain Description: PinE Location: 49403-4991 6 bp Feature: gene Location: 50205-50908 bp Feature: gene Location: 51587-52837 bp Ori: KZQ36077.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51791-52445 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 51 791 -52445 bp Feature: domain Description: GIIM Note: maturase Location: 52532-52736 bp Feature: domain Description: GIIM Note: maturase Location: 52532-52736 bp Feature: gene Location: 53332-53739 bp Feature: domain Description: HTH_29 Location: 53377-53554 bp Feature: domain Description: HTH_29 Location: 53377-53554 bp Feature: gene Location: 54123-55151 bp Ori: KZQ36078.1 Feature: domain Description: Fes Location: 54366-55059 bp Feature: domain Description: Fes Location: 54366-55059 bp Feature: gene Location: 81946-82338 bp Feature: gene Location: 83040-83732 bp Ori: KZQ36096.1 Feature: domain Description: FKBP_N Location: 83166-83379 bp Feature: domain Description: FKBP_N Location: 831 66-83379 bp Feature: gene Location: 84328-85026 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84340-84499 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84340-84499 bp Feature: domain Description: GIIM Note: maturase Location: 84649-84781 bp Feature: domain Description: GIIM Note: maturase Location: 84649-84781 bp Feature: gene Location: 85340-85557 bp Feature: domain Description: PHA02517 Location: 85346-85448 bp Feature: domain Description: PHA0251 7 Location: 85346-85448 bp Feature: gene Location: 86285-87028 bp Ori: KZQ36097.1 Feature: domain Description: CadC1 Location: 86342-86630 bp Feature: domain Description: CadC1 Location: 86342-86630 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), RVT-GII, GIIM (pfam08388), HTH_29 (pfam13551), Fes (COG2382), FKBP_N (pfam01346), PHA02517 (putative transposase OrfB; Reviewed), CadC1 (COG3710)