myRT

myRT report for GCA_001631535.1_ASM163153v1

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Seq: LVTQ01000016.1 Enterobacter roggenkampii strain GN04673 GCID_ENTE_00259_NODE_112.ctg_1, whole genome shotgun sequence (16491 bp)
Overview 1 RT 1: 7220-14332 bp Neighborhood of RT #1 [7220, 14332] proA PRK09692 RVT-UG7 Feature: gene Location: 7220-8473 bp Ori: KZQ25601.1 Feature: domain Description: proA Location: 7247-8438 bp Feature: domain Description: proA Location: 7247-8438 bp Feature: gene Location: 8825-9997 bp Ori: KZQ25602.1 Feature: domain Description: PRK09692 Location: 8831-9986 bp Feature: domain Description: PRK09692 Location: 8831 -9986 bp Feature: gene Location: 10314-11942 bp Ori: KZQ25603.1 Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 10722-11151 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 1 0722-1 1 1 51 bp Feature: gene Location: 11939-12679 bp Feature: gene Location: 13520-14332 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT proA (TIGR00407), PRK09692 (Integrase; provisional), RVT-UG7

Seq: LVTQ01000175.1 Enterobacter roggenkampii strain GN04673 GCID_ENTE_00259_NODE_256.ctg_1, whole genome shotgun sequence (814 bp)
Overview 1 RT 1: 47-434 bp Neighborhood of RT #1 [47, 724] RVT-UG17 Feature: gene Location: 47-724 bp Ori: KZQ16960.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 116-434 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 116-434 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17

Seq: LVTQ01000088.1 Enterobacter roggenkampii strain GN04673 GCID_ENTE_00259_NODE_178.ctg_1, whole genome shotgun sequence (7761 bp)
Overview 1 RT 1: 210-5405 bp Neighborhood of RT #1 [210, 5431] RVT-GII GIIM LZ_Tnp_IS66 zf-IS66 DDE_Tnp_IS66 DDE_Tnp_IS66_C Tar Feature: gene Location: 210-1718 bp Ori: KZQ21282.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 468-1200 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 468-1200 bp Feature: domain Description: GIIM Note: maturase Location: 1275-1473 bp Feature: domain Description: GIIM Note: maturase Location: 1275-1473 bp Feature: gene Location: 2245-3762 bp Ori: KZQ21278.1 Feature: domain Description: LZ_Tnp_IS66 Location: 2341-2554 bp Feature: domain Description: LZ_Tnp_IS66 Location: 23 41-2554 bp Feature: domain Description: zf-IS66 Location: 2578-2707 bp Feature: domain Description: zf-IS66 Location: 2578-2707 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2752-3607 bp Feature: domain Description: DDE_Tnp_IS66 Location: 2752-3 607 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3628-3739 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3 628-3 73 9 bp Feature: gene Location: 3866-5431 bp Ori: KZQ21279.1 Feature: domain Description: Tar Location: 4262-5405 bp Feature: domain Description: Tar Location: 4262-5405 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), LZ_Tnp_IS66 (pfam13007), zf-IS66 (pfam13005), DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), Tar (COG0840)

Seq: LVTQ01000155.1 Enterobacter roggenkampii strain GN04673 GCID_ENTE_00259_NODE_238.ctg_1, whole genome shotgun sequence (1254 bp)
Overview 1 RT 1: 1-1056 bp Neighborhood of RT #1 [1, 1136] RVT-UG17 Feature: gene Location: 1-523 bp Feature: gene Location: 507-1136 bp Ori: KZQ17802.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 735-1056 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 735-1056 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG17