myRT

myRT report for GCA_001631815.1_ASM163181v1

Download annotations/find similar RTs

Seq: LVUP01000079.1 Klebsiella aerogenes strain GN04222 GCID_ENTE_00284_NODE_17.ctg_1, whole genome shotgun sequence (59194 bp)
Overview 1 RT 1: 43934-56443 bp Neighborhood of RT #1 [43934, 56448] Lhr GerD RVT-UG1 DEXXQc_Upf1-like DEXXQc_Upf1-like KOG1803 PRK09692 Feature: gene Location: 43934-46132 bp Ori: KZR13853.1 Feature: domain Description: Lhr Location: 43940-45680 bp Feature: domain Description: Lhr Location: 43940-45680 bp Feature: gene Location: 46448-46882 bp Ori: KZR13854.1 Feature: domain Description: GerD Location: 46526-46640 bp Feature: domain Description: GerD Location: 46526-46640 bp Feature: gene Location: 46891-50580 bp Ori: KZR13855.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 47503-48013 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 47503-4801 3 bp Feature: gene Location: 51433-55068 bp Ori: KZR13856.1 Feature: domain Description: DEXXQc_Upf1-like Location: 52663-52972 bp Feature: domain Description: DEXXQc_Upf1 -like Location: 52663-52972 bp Feature: domain Description: DEXXQc_Upf1-like Location: 54142-54346 bp Feature: domain Description: DEXXQc_Upf1 -like Location: 541 42-54346 bp Feature: domain Description: KOG1803 Location: 54652-55003 bp Feature: domain Description: KOG1 803 Location: 54652-55003 bp Feature: gene Location: 55207-56448 bp Ori: KZR13857.1 Feature: domain Description: PRK09692 Location: 55210-56443 bp Feature: domain Description: PRK09692 Location: 5521 0-56443 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Lhr (COG1201), GerD (pfam17898), RVT-UG1, DEXXQc_Upf1-like (cd17934), KOG1803 (KOG1803, DNA helicase ), PRK09692 (Integrase; provisional)