myRT

myRT report for GCA_001632185.1_ASM163218v1

Download annotations/find similar RTs

Seq: LVTO01000019.1 Bacillus badius strain DSM 5610 DSM5610_contig_26, whole genome shotgun sequence (188920 bp)
Overview 1 RT 1: 104092-111659 bp Neighborhood of RT #1 [104092, 111667] HTH_36 radc RVT-GII Intron_maturas2 RVT-GII Intron_maturas2 PRK00024 PRK13927 Feature: gene Location: 104092-104919 bp Feature: domain Description: HTH_36 Location: 104218-104380 bp Feature: domain Description: HTH_36 Location: 1 0421 8-1 04380 bp Feature: gene Location: 105126-105386 bp Feature: domain Description: radc Location: 105129-105381 bp Feature: domain Description: radc Location: 1 051 29-1 05381 bp Feature: gene Location: 105984-107516 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 106248-107055 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 06248-1 07055 bp Feature: domain Description: Intron_maturas2 Location: 107133-107424 bp Feature: domain Description: Intron_maturas2 Location: 1 071 33-1 07424 bp Feature: gene Location: 108417-110225 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 108684-109521 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 08684-1 09521 bp Feature: domain Description: Intron_maturas2 Location: 109617-109887 bp Feature: domain Description: Intron_maturas2 Location: 1 0961 7-1 09887 bp Feature: gene Location: 110342-110518 bp Feature: domain Description: PRK00024 Location: 110381-110513 bp Feature: domain Description: PRK00024 Location: 1 1 0381 -1 1 051 3 bp Feature: gene Location: 110651-111667 bp Feature: domain Description: PRK13927 Location: 110660-111659 bp Feature: domain Description: PRK1 3927 Location: 1 1 0660-1 1 1 659 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_36 (pfam13730), radc (TIGR00608), RVT-GII, Intron_maturas2 (pfam01348), PRK00024 (DNA repair protein RadC), PRK13927 (rod shape-determining protein MreB; Provisional)

Seq: LVTO01000021.1 Bacillus badius strain DSM 5610 DSM5610_contig_28, whole genome shotgun sequence (46463 bp)
Overview 1 RT 1: 18580-26253 bp Neighborhood of RT #1 [18580, 26258] PcrB pcrA RVT-GII HNHc pcrA ligA Feature: gene Location: 18580-19272 bp Feature: domain Description: PcrB Location: 18586-19258 bp Feature: domain Description: PcrB Location: 18586-192 58 bp Feature: gene Location: 19308-20006 bp Feature: domain Description: pcrA Location: 19332-19992 bp Feature: domain Description: pcrA Location: 19332 -19992 bp Feature: gene Location: 20737-22617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21064-21799 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1064-2 1799 bp Feature: domain Description: HNHc Note: nucleases Location: 22393-22492 bp Feature: domain Description: HNHc Note: nucleases Location: 2 2 393-2 2 492 bp Feature: gene Location: 22714-24231 bp Feature: domain Description: pcrA Location: 22717-24223 bp Feature: domain Description: pcrA Location: 2 2 717-2 42 2 3 bp Feature: gene Location: 24249-26258 bp Feature: domain Description: ligA Location: 24261-26253 bp Feature: domain Description: ligA Location: 2 42 61-2 62 53 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PcrB (pfam01884), pcrA (TIGR01073), RVT-GII, HNHc (smart00507), ligA (PRK14351)