myRT

myRT report for GCA_001636425.1_ASM163642v1

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Seq: KV440953.1 Bacillus acidicola strain FJAT-2406 genomic scaffold Scaffold1, whole genome shotgun sequence (4770726 bp)
Overview 1 RT 1: 179681-185740 bp 2 RT 2: 3065497-3071053 bp Neighborhood of RT #1 [179681, 185766] RadC RVT-GII HNHc PRK13927 PRK13922 Neighborhood of RT #2 [3065497, 3071082] PRK04351 Tex RVT-GII PP2C_SIG PRK08583 Feature: gene Location: 179681-180274 bp Feature: domain Description: RadC Location: 179699-180257 bp Feature: domain Description: RadC Location: 1 79699-1 80257 bp Feature: gene Location: 180646-180810 bp Feature: gene Location: 181076-182887 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 181334-182066 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 81 334-1 82066 bp Feature: domain Description: HNHc Note: nucleases Location: 182645-182774 bp Feature: domain Description: HNHc Note: nucleases Location: 1 82645-1 82774 bp Feature: gene Location: 183348-184364 bp Feature: domain Description: PRK13927 Location: 183357-184347 bp Feature: domain Description: PRK1 3927 Location: 1 83357-1 84347 bp Feature: gene Location: 184909-185766 bp Feature: domain Description: PRK13922 Location: 184912-185740 bp Feature: domain Description: PRK1 3922 Location: 1 8491 2-1 85740 bp Feature: gene Location: 3065497-3065949 bp Feature: domain Description: PRK04351 Location: 3065500-3065944 bp Feature: domain Description: PRK04351 Location: 3065500-3065944 bp Feature: gene Location: 3066323-3068497 bp Feature: domain Description: Tex Location: 3066347-3068489 bp Feature: domain Description: Tex Location: 3066347-3068489 bp Feature: gene Location: 3068910-3069182 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3069111-3069159 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 30691 1 1 -30691 59 bp Feature: gene Location: 3069701-3070297 bp Feature: domain Description: PP2C_SIG Location: 3069743-3070235 bp Feature: domain Description: PP2C_SIG Location: 3069743-3070235 bp Feature: gene Location: 3070294-3071082 bp Feature: domain Description: PRK08583 Location: 3070324-3071053 bp Feature: domain Description: PRK08583 Location: 3070324-3071 053 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RadC (pfam04002), RVT-GII, HNHc (smart00507), PRK13927 (rod shape-determining protein MreB; Provisional), PRK13922 (rod shape-determining protein MreC; Provisional), PRK04351 (SprT family protein), Tex (COG2183), PP2C_SIG (smart00331), PRK08583 (RNA polymerase sigma factor SigB; Validated)