myRT

myRT report for GCA_001636835.1_ASM163683v1

Download annotations/find similar RTs

Seq: LITQ01000039.1 Clostridium coskatii strain PS02 scaffold34, whole genome shotgun sequence (41111 bp)
Overview 1 RT 1: 20943-25387 bp Neighborhood of RT #1 [20943, 25407] RVT_N RVT-GII GIIM HTH_28 HTH_28 HTH_28 PHA02517 HxlR Feature: gene Location: 20943-21038 bp Feature: gene Location: 21241-21432 bp Feature: gene Location: 21769-23307 bp Feature: RT Description: RVT_N Location: 21841-22081 bp Feature: RT Description: RVT_N Location: 21 841 -22081 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22129-22789 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 221 29-22789 bp Feature: domain Description: GIIM Note: maturase Location: 22840-23077 bp Feature: domain Description: GIIM Note: maturase Location: 22840-23077 bp Feature: gene Location: 23836-25014 bp Feature: domain Description: HTH_28 Location: 23869-24001 bp Feature: domain Description: HTH_28 Location: 23869-24001 bp Feature: domain Description: HTH_28 Location: 24043-24154 bp Feature: domain Description: HTH_28 Location: 24043-241 54 bp Feature: domain Description: HTH_28 Location: 24232-24382 bp Feature: domain Description: HTH_28 Location: 24232-24382 bp Feature: domain Description: PHA02517 Location: 24475-24994 bp Feature: domain Description: PHA0251 7 Location: 24475-24994 bp Feature: gene Location: 25087-25407 bp Feature: domain Description: HxlR Location: 25096-25387 bp Feature: domain Description: HxlR Location: 25096-25387 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HTH_28 (pfam13518), PHA02517 (putative transposase OrfB; Reviewed), HxlR (pfam01638)