myRT

myRT report for GCA_001636945.1_ASM163694v1

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Seq: LWRP01000172.1 Streptomyces sp. FXJ1.172 contig00202, whole genome shotgun sequence (34630 bp)
Overview 1 RT 1: 14629-21391 bp 2 RT 2: 31671-34462 bp Neighborhood of RT #1 [14629, 21426] DUF664 DDE_Tnp_1_2 RVT-GII Intron_maturas2 HNHc DDE_5 PRK08244 Neighborhood of RT #2 [31671, 34620] LCB5 DDE_Tnp_ISL3 RVT-GII GIIM Feature: gene Location: 14629-15144 bp Feature: domain Description: DUF664 Location: 14680-15130 bp Feature: domain Description: DUF664 Location: 1 4680-1 51 30 bp Feature: gene Location: 15158-15571 bp Feature: domain Description: DDE_Tnp_1_2 Location: 15281-15566 bp Feature: domain Description: DDE_Tnp_1 _2 Location: 1 5281 -1 5566 bp Feature: gene Location: 15916-17601 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 16042-16837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 6042-1 6837 bp Feature: domain Description: Intron_maturas2 Location: 16939-17170 bp Feature: domain Description: Intron_maturas2 Location: 1 6939-1 71 70 bp Feature: domain Description: HNHc Note: nucleases Location: 17365-17527 bp Feature: domain Description: HNHc Note: nucleases Location: 1 7365-1 7527 bp Feature: gene Location: 18606-19871 bp Feature: domain Description: DDE_5 Location: 18651-19437 bp Feature: domain Description: DDE_5 Location: 1 8651 -1 9437 bp Feature: gene Location: 19939-21426 bp Feature: domain Description: PRK08244 Location: 19951-21391 bp Feature: domain Description: PRK08244 Location: 1 9951 -21 391 bp Feature: gene Location: 31671-32477 bp Feature: domain Description: LCB5 Location: 31677-32382 bp Feature: domain Description: LCB5 Location: 31 677-32382 bp Feature: gene Location: 32621-33437 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 33056-33407 bp Feature: domain Description: DDE_Tnp_ISL3 Location: 33056-33407 bp Feature: gene Location: 33541-34620 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33544-34171 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 33544-341 71 bp Feature: domain Description: GIIM Note: maturase Location: 34246-34462 bp Feature: domain Description: GIIM Note: maturase Location: 34246-34462 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF664 (pfam04978), DDE_Tnp_1_2 (pfam13586), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DDE_5 (pfam13546), PRK08244 (monooxygenase), LCB5 (COG1597), DDE_Tnp_ISL3 (pfam01610), GIIM (pfam08388)

Seq: LWRP01000185.1 Streptomyces sp. FXJ1.172 contig00228, whole genome shotgun sequence (1922 bp)
Overview 1 RT 1: 276-1787 bp Neighborhood of RT #1 [276, 1912] ArsR RVT-GII GIIM Feature: gene Location: 276-587 bp Feature: domain Description: ArsR Location: 321-540 bp Feature: domain Description: ArsR Location: 32 1-540 bp Feature: gene Location: 857-1912 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 860-1493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 860-1493 bp Feature: domain Description: GIIM Note: maturase Location: 1562-1787 bp Feature: domain Description: GIIM Note: maturase Location: 1562 -1787 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ArsR (pfam09824), RVT-GII, GIIM (pfam08388)