myRT

myRT report for GCA_001637165.1_ASM163716v1

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Seq: LVJF01000036.1 Paenibacillus macquariensis subsp. macquariensis strain DSM 2 PMSM36, whole genome shotgun sequence (126089 bp)
Overview 1 RT 1: 119435-124412 bp Neighborhood of RT #1 [119435, 124412] DUF4181 CPT RVT-GII PheA2 Feature: gene Location: 119435-119782 bp Ori: OAB29916.1 Feature: domain Description: DUF4181 Location: 119471-119777 bp Feature: domain Description: DUF41 81 Location: 1 1 9471 -1 1 9777 bp Feature: gene Location: 119973-120569 bp Ori: OAB29917.1 Feature: domain Description: CPT Location: 119985-120504 bp Feature: domain Description: CPT Location: 1 1 9985-1 20504 bp Feature: gene Location: 121808-122374 bp Ori: OAB29918.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 121811-122168 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 21 81 1 -1 221 68 bp Feature: gene Location: 122659-123507 bp Ori: OAB29919.1 Feature: domain Description: PheA2 Location: 122662-123481 bp Feature: domain Description: PheA2 Location: 1 22662-1 23481 bp Feature: gene Location: 123771-124412 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4181 (pfam13789), CPT (pfam07931), RVT-GII, PheA2 (COG0077)

Seq: LVJF01000019.1 Paenibacillus macquariensis subsp. macquariensis strain DSM 2 PMSM19, whole genome shotgun sequence (61331 bp)
Overview 1 RT 1: 11826-19958 bp Neighborhood of RT #1 [11826, 20137] TIGR02646 RVT-UG1 nitrilase DGQHR Feature: gene Location: 11826-12953 bp Ori: OAB35046.1 Feature: domain Description: TIGR02646 Location: 12345-12744 bp Feature: domain Description: TIGR02 646 Location: 12 345-12 744 bp Feature: gene Location: 13266-13544 bp Feature: gene Location: 14140-17988 bp Ori: OAB35048.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 14776-15325 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 14776-1532 5 bp Feature: domain Description: nitrilase Location: 17278-17923 bp Feature: domain Description: nitrilase Location: 172 78-1792 3 bp Feature: gene Location: 18099-19367 bp Feature: gene Location: 19607-20137 bp Ori: OAB35050.1 Feature: domain Description: DGQHR Location: 19649-19958 bp Feature: domain Description: DGQHR Location: 19649-19958 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), RVT-UG1, nitrilase (cl11424), DGQHR (TIGR03187)

Seq: LVJF01000003.1 Paenibacillus macquariensis subsp. macquariensis strain DSM 2 PMSM03, whole genome shotgun sequence (23083 bp)
Overview 1 RT 1: 4258-9629 bp Neighborhood of RT #1 [4258, 9629] Tra5 RVT-GII GIIM HTH_Tnp_1 HTH_Tnp_1 Feature: gene Location: 4258-5259 bp Feature: gene Location: 5801-6889 bp Ori: OAB38923.1 Feature: domain Description: Tra5 Location: 5882-6731 bp Feature: domain Description: Tra5 Location: 5882-673 1 bp Feature: gene Location: 6974-8215 bp Ori: OAB38908.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7178-7835 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7178-783 5 bp Feature: domain Description: GIIM Note: maturase Location: 7916-8129 bp Feature: domain Description: GIIM Note: maturase Location: 7916-8129 bp Feature: gene Location: 8734-9231 bp Ori: OAB38909.1 Feature: domain Description: HTH_Tnp_1 Location: 8740-8893 bp Feature: domain Description: HTH_Tnp_1 Location: 8740-8893 bp Feature: domain Description: HTH_Tnp_1 Location: 8914-9112 bp Feature: domain Description: HTH_Tnp_1 Location: 8914-9112 bp Feature: gene Location: 9315-9629 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Tra5 (COG2801), RVT-GII, GIIM (pfam08388), HTH_Tnp_1 (pfam01527)