myRT

myRT report for GCA_001637185.1_ASM163718v1

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Seq: LVJE01000049.1 Flavobacterium fryxellicola strain DSM 16209 FBFR49, whole genome shotgun sequence (778 bp)
Overview 1 RT 1: 1-505 bp Neighborhood of RT #1 [1, 506] RVT-GII Feature: gene Location: 1-506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 196-505 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 96-505 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: LVJE01000006.1 Flavobacterium fryxellicola strain DSM 16209 FBFR06, whole genome shotgun sequence (193095 bp)
Overview 1 RT 1: 3702-13012 bp 2 RT 2: 190244-192859 bp Neighborhood of RT #1 [3702, 13278] HsdM RMtype1_S_EcoEI-TRD1-CR1_like PRK09737 RMtype1_S_EcoEI-TRD1-CR1_like RVT-UG5 PRK11331 PRK11331 McrBC Neighborhood of RT #2 [190244, 193059] RVT-GII GIIM Feature: gene Location: 3702-5318 bp Ori: OAB29662.1 Feature: domain Description: HsdM Location: 3732-5301 bp Feature: domain Description: HsdM Location: 3732 -5301 bp Feature: gene Location: 5311-6621 bp Ori: OAB29663.1 Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 5392-5872 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 5392 -5872 bp Feature: domain Description: PRK09737 Location: 5965-6271 bp Feature: domain Description: PRK09737 Location: 5965-62 71 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 6358-6529 bp Feature: domain Description: RMtype1_S_EcoEI-TRD1-CR1_like Location: 6358-652 9 bp Feature: gene Location: 6624-9599 bp Ori: OAB29664.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 7125-7626 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 712 5-762 6 bp Feature: gene Location: 9754-11865 bp Ori: OAB29665.1 Feature: domain Description: PRK11331 Location: 10648-10831 bp Feature: domain Description: PRK11331 Location: 10648-10831 bp Feature: domain Description: PRK11331 Location: 11326-11815 bp Feature: domain Description: PRK11331 Location: 1132 6-11815 bp Feature: gene Location: 11869-13278 bp Ori: OAB29666.1 Feature: domain Description: McrBC Location: 12070-13012 bp Feature: domain Description: McrBC Location: 12 070-13012 bp Feature: gene Location: 190244-190759 bp Feature: gene Location: 191097-191543 bp Feature: gene Location: 191764-193059 bp Ori: OAB29813.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 191959-192574 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 191959-192 574 bp Feature: domain Description: GIIM Note: maturase Location: 192646-192859 bp Feature: domain Description: GIIM Note: maturase Location: 192 646-192 859 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RMtype1_S_EcoEI-TRD1-CR1_like (cd17260), PRK09737 (type I restriction-modification system specificity subunit), RVT-UG5, PRK11331 (5-methylcytosine-specific restriction enzyme subunit McrB; Provisional), McrBC (pfam10117), RVT-GII, GIIM (pfam08388)