myRT

myRT report for GCA_001637645.1_ASM163764v1

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Seq: JXUH01000017.1 Escherichia coli strain 131/07 EC13107_17c, whole genome shotgun sequence (75563 bp)
Overview 1 RT 1: 6597-10586 bp Neighborhood of RT #1 [6597, 10792] RVT-Retrons COG3950 TIGR02646 Feature: gene Location: 6597-6785 bp Feature: gene Location: 6864-7130 bp Feature: gene Location: 7540-8475 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7642-8236 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 7642-8236 bp Feature: gene Location: 8472-10127 bp Feature: domain Description: COG3950 Location: 8628-10074 bp Feature: domain Description: COG3950 Location: 8628-1 0074 bp Feature: gene Location: 10124-10792 bp Feature: domain Description: TIGR02646 Location: 10190-10586 bp Feature: domain Description: TIGR02646 Location: 1 01 90-1 0586 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR02646 (TIGR02646 family protein), RVT-Retrons, COG3950 (Predicted ATP-binding protein involved in virulence )

Seq: JXUH01000206.1 Escherichia coli strain 131/07 EC13107_206c, whole genome shotgun sequence (2363 bp)
Overview 1 RT 1: 593-2243 bp Neighborhood of RT #1 [593, 2281] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 593-2281 bp Feature: RT Description: RVT_N Location: 653-896 bp Feature: RT Description: RVT_N Location: 653-896 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 941-1583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 941-1583 bp Feature: domain Description: GIIM Note: maturase Location: 1637-1868 bp Feature: domain Description: GIIM Note: maturase Location: 1637-1868 bp Feature: domain Description: HNHc Note: nucleases Location: 2081-2243 bp Feature: domain Description: HNHc Note: nucleases Location: 2 081-2 2 43 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)