myRT

myRT report for GCA_001637655.1_ASM163765v1

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Seq: JYPB01000069.1 Escherichia coli strain RiKo 2305/09 RIKO2305_69c, whole genome shotgun sequence (19687 bp)
Overview 1 RT 1: 32-3490 bp Neighborhood of RT #1 [32, 3490] Peptidase_S74 RVT-UG17 SLATT_5 Feature: gene Location: 32-859 bp Ori: OAC10156.1 Feature: domain Description: Peptidase_S74 Location: 485-632 bp Feature: domain Description: Peptidase_S74 Location: 485-632 bp Feature: gene Location: 1055-1189 bp Feature: gene Location: 1297-2667 bp Ori: OAC10158.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 1525-2131 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 525-21 31 bp Feature: gene Location: 2645-3196 bp Ori: OAC10159.1 Feature: domain Description: SLATT_5 Location: 2651-3167 bp Feature: domain Description: SLATT_5 Location: 2651 -31 67 bp Feature: gene Location: 3323-3490 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Peptidase_S74 (pfam13884), RVT-UG17, SLATT_5 (pfam18160)

Seq: JYPB01000057.1 Escherichia coli strain RiKo 2305/09 RIKO2305_57c, whole genome shotgun sequence (184214 bp)
Overview 1 RT 1: 49409-53292 bp Neighborhood of RT #1 [49409, 53297] dut slmA RVT-Retrons pyrE rph Feature: gene Location: 49409-49867 bp Ori: OAC11222.1 Gene: dut Feature: domain Description: dut Location: 49415-49862 bp Feature: domain Description: dut Location: 49415-49862 bp Feature: gene Location: 49974-50570 bp Ori: OAC11223.1 Gene: slmA Feature: domain Description: slmA Location: 49980-50556 bp Feature: domain Description: slmA Location: 49980-50556 bp Feature: gene Location: 50616-51575 bp Ori: OAC11224.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50751-51300 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50751-51300 bp Feature: gene Location: 51873-52514 bp Ori: OAC11225.1 Gene: pyrE Feature: domain Description: pyrE Location: 51876-52509 bp Feature: domain Description: pyrE Location: 51876-52 509 bp Feature: gene Location: 52581-53297 bp Ori: OAC11226.1 Gene: rph Feature: domain Description: rph Location: 52584-53292 bp Feature: domain Description: rph Location: 52 584-532 92 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173)