myRT

myRT report for GCA_001640185.1_ASM164018v1

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Seq: LSBZ01000030.1 Klebsiella pneumoniae strain EA_Carb scaffold_29, whole genome shotgun sequence (41198 bp)
Overview 1 RT 1: 2298-9166 bp Neighborhood of RT #1 [2298, 9168] FimC FimD RVT-UG4 Integrase_1 INT_P4_C Feature: gene Location: 2298-3026 bp Feature: domain Description: FimC Location: 2346-3009 bp Feature: domain Description: FimC Location: 2346-3009 bp Feature: gene Location: 3058-5667 bp Feature: domain Description: FimD Location: 3115-5656 bp Feature: domain Description: FimD Location: 31 1 5-5656 bp Feature: gene Location: 5667-7745 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 6075-6519 bp Feature: RT Description: RVT-UG4 Note: UG4 RT Location: 6075-651 9 bp Feature: gene Location: 7802-8242 bp Feature: domain Description: Integrase_1 Location: 7808-8024 bp Feature: domain Description: Integrase_1 Location: 7808-8024 bp Feature: gene Location: 8503-9168 bp Feature: domain Description: INT_P4_C Location: 8608-9166 bp Feature: domain Description: INT_P4_C Location: 8608-91 66 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FimC (COG3121), FimD (COG3188), RVT-UG4, Integrase_1 (pfam12835), INT_P4_C (cd00801)

Seq: LSBZ01000099.1 Klebsiella pneumoniae strain EA_Carb scaffold_98, whole genome shotgun sequence (19878 bp)
Overview 1 RT 1: 2-3235 bp Neighborhood of RT #1 [2, 3235] RVT-GII INT_Cre_C Feature: gene Location: 2-322 bp Feature: gene Location: 347-1834 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752-1442 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 752 -1442 bp Feature: gene Location: 1710-2852 bp Feature: domain Description: INT_Cre_C Location: 2139-2793 bp Feature: domain Description: INT_Cre_C Location: 2 139-2 793 bp Feature: gene Location: 2918-3235 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, INT_Cre_C (cd00799)