myRT

myRT report for GCA_001640325.1_ASM164032v1

Download annotations/find similar RTs

Seq: LTYV01000027.1 Aliivibrio fischeri strain KB1A98 contig_27, whole genome shotgun sequence (538141 bp)
Overview 1 RT 1: 115385-123169 bp 2 RT 2: 504024-508569 bp Neighborhood of RT #1 [115385, 123195] COG3046 AE_Prim_S_like RVT-UG10 HipA_Ec_like Neighborhood of RT #2 [504024, 508569] SpoU-like EcKinase EcKinase RVT-Retrons AAA_15 AAA_15 Feature: gene Location: 115385-116962 bp Feature: domain Description: COG3046 Location: 115412-116954 bp Feature: domain Description: COG3046 Location: 1 1 541 2-1 1 6954 bp Feature: gene Location: 117144-117302 bp Feature: gene Location: 117317-122644 bp Feature: domain Description: AE_Prim_S_like Location: 117392-117698 bp Feature: domain Description: AE_Prim_S_like Location: 1 1 7392-1 1 7698 bp Feature: RT Description: RVT-UG10 Note: UG10 RT Location: 118652-119309 bp Feature: RT Description: RVT-UG1 0 Note: UG1 0 RT Location: 1 1 8652-1 1 9309 bp Feature: gene Location: 122649-122846 bp Feature: gene Location: 122857-123195 bp Feature: domain Description: HipA_Ec_like Location: 122956-123169 bp Feature: domain Description: HipA_Ec_like Location: 1 22956-1 231 69 bp Feature: gene Location: 504024-504482 bp Feature: domain Description: SpoU-like Location: 504045-504447 bp Feature: domain Description: SpoU-like Location: 504045-504447 bp Feature: gene Location: 504517-505476 bp Feature: domain Description: EcKinase Location: 504724-504943 bp Feature: domain Description: EcKinase Location: 504724-504943 bp Feature: domain Description: EcKinase Location: 505081-505309 bp Feature: domain Description: EcKinase Location: 505081 -505309 bp Feature: gene Location: 505917-506888 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 506040-506601 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 506040-506601 bp Feature: gene Location: 506885-508225 bp Feature: domain Description: AAA_15 Location: 506894-507104 bp Feature: domain Description: AAA_1 5 Location: 506894-5071 04 bp Feature: domain Description: AAA_15 Location: 507287-507617 bp Feature: domain Description: AAA_1 5 Location: 507287-50761 7 bp Feature: gene Location: 508363-508569 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3046 (Uncharacterized protein related to deoxyribodipyrimidine photolyase ), AE_Prim_S_like (cl01287), RVT-UG10, HipA_Ec_like (cd17808), SpoU-like (cd18098), EcKinase (pfam02958), RVT-Retrons, AAA_15 (pfam13175)