myRT

myRT report for GCA_001640455.1_ASM164045v1

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Seq: LTYZ01000001.1 Aliivibrio fischeri strain MB15A4 contig_1, whole genome shotgun sequence (346758 bp)
Overview 1 RT 1: 216080-220361 bp Neighborhood of RT #1 [216080, 220361] secD secF RVT-Retrons HTH_19 Feature: gene Location: 216080-217903 bp Feature: domain Description: secD Location: 216083-217901 bp Feature: domain Description: secD Location: 21 6083-21 7901 bp Feature: gene Location: 217907-218806 bp Feature: domain Description: secF Location: 217919-218804 bp Feature: domain Description: secF Location: 21 791 9-21 8804 bp Feature: gene Location: 218938-219888 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 219121-219661 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 21 91 21 -21 9661 bp Feature: gene Location: 219866-220174 bp Feature: domain Description: HTH_19 Location: 219884-220046 bp Feature: domain Description: HTH_1 9 Location: 21 9884-220046 bp Feature: gene Location: 220212-220361 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT secD (TIGR01129), secF (PRK13022), RVT-Retrons, HTH_19 (pfam12844)

Seq: LTYZ01000003.1 Aliivibrio fischeri strain MB15A4 contig_3, whole genome shotgun sequence (195873 bp)
Overview 1 RT 1: 53924-59346 bp Neighborhood of RT #1 [53924, 59627] formate-DH-gamm SEC-C RVT-UG12 PIN7 Feature: gene Location: 53924-54946 bp Feature: domain Description: formate-DH-gamm Location: 54296-54905 bp Feature: domain Description: formate-DH-gamm Location: 542 96-54905 bp Feature: gene Location: 55393-56517 bp Feature: domain Description: SEC-C Location: 55414-55465 bp Feature: domain Description: SEC-C Location: 55414-55465 bp Feature: gene Location: 56657-58267 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 57020-57449 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 5702 0-57449 bp Feature: gene Location: 58412-58888 bp Feature: gene Location: 59031-59627 bp Feature: domain Description: PIN7 Location: 59052-59346 bp Feature: domain Description: PIN7 Location: 59052 -59346 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT formate-DH-gamm (TIGR01583), SEC-C (pfam02810), RVT-UG12, PIN7 (pfam18475)