myRT

myRT report for GCA_001640745.1_ASM164074v1

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Seq: LODM01000012.1 Bacillus megaterium strain SF185 bases, whole genome shotgun sequence (3794667 bp)
Overview 1 RT 1: 835074-842770 bp 2 RT 2: 852709-859611 bp 3 RT 3: 2268231-2274582 bp Neighborhood of RT #1 [835074, 842790] AnsP RVT_N RVT-GII GIIM SpoOE-like PocR AraC Neighborhood of RT #2 [852709, 859703] FrsA DUF3231 DUF3231 RVT_N RVT-GII GIIM YdeN 2a38 Neighborhood of RT #3 [2268231, 2274582] FhlA PRK11360 RimL RVT-GII Intron_maturas2 HNHc DAO Feature: gene Location: 835074-835517 bp Feature: gene Location: 835831-837207 bp Feature: domain Description: AnsP Location: 835837-837172 bp Feature: domain Description: AnsP Location: 835837-8371 72 bp Feature: gene Location: 838485-840134 bp Feature: RT Description: RVT_N Location: 838533-838779 bp Feature: RT Description: RVT_N Location: 838533-838779 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 838833-839493 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 838833-839493 bp Feature: domain Description: GIIM Note: maturase Location: 839562-839793 bp Feature: domain Description: GIIM Note: maturase Location: 839562-839793 bp Feature: gene Location: 841321-841473 bp Feature: domain Description: SpoOE-like Location: 841333-841447 bp Feature: domain Description: SpoOE-like Location: 841 333-841 447 bp Feature: gene Location: 841762-842790 bp Feature: domain Description: PocR Location: 841780-842284 bp Feature: domain Description: PocR Location: 841 780-842284 bp Feature: domain Description: AraC Location: 842470-842770 bp Feature: domain Description: AraC Location: 842470-842770 bp Feature: gene Location: 852709-853611 bp Feature: domain Description: FrsA Location: 852721-853609 bp Feature: domain Description: FrsA Location: 852721 -853609 bp Feature: gene Location: 853903-854907 bp Feature: domain Description: DUF3231 Location: 853918-854374 bp Feature: domain Description: DUF3231 Location: 85391 8-854374 bp Feature: domain Description: DUF3231 Location: 854410-854890 bp Feature: domain Description: DUF3231 Location: 85441 0-854890 bp Feature: gene Location: 855152-856801 bp Feature: RT Description: RVT_N Location: 855200-855446 bp Feature: RT Description: RVT_N Location: 855200-855446 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 855500-856160 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 855500-8561 60 bp Feature: domain Description: GIIM Note: maturase Location: 856226-856460 bp Feature: domain Description: GIIM Note: maturase Location: 856226-856460 bp Feature: gene Location: 857544-858110 bp Feature: domain Description: YdeN Location: 857553-858102 bp Feature: domain Description: YdeN Location: 857553-8581 02 bp Feature: gene Location: 858348-859703 bp Feature: domain Description: 2a38 Location: 858453-859611 bp Feature: domain Description: 2a38 Location: 858453-85961 1 bp Feature: gene Location: 2268231-2269367 bp Feature: domain Description: FhlA Location: 2268399-2268678 bp Feature: domain Description: FhlA Location: 2268399-2268678 bp Feature: domain Description: PRK11360 Location: 2268687-2269359 bp Feature: domain Description: PRK1 1 360 Location: 2268687-2269359 bp Feature: gene Location: 2269448-2270020 bp Feature: domain Description: RimL Location: 2269454-2269982 bp Feature: domain Description: RimL Location: 2269454-2269982 bp Feature: gene Location: 2270385-2272208 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2270649-2271483 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2270649-2271 483 bp Feature: domain Description: Intron_maturas2 Location: 2271555-2271855 bp Feature: domain Description: Intron_maturas2 Location: 2271 555-2271 855 bp Feature: domain Description: HNHc Note: nucleases Location: 2272029-2272182 bp Feature: domain Description: HNHc Note: nucleases Location: 2272029-22721 82 bp Feature: gene Location: 2272793-2273824 bp Feature: domain Description: DAO Location: 2272883-2273786 bp Feature: domain Description: DAO Location: 2272883-2273786 bp Feature: gene Location: 2274301-2274582 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AnsP (COG1113), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), SpoOE-like (pfam09388), PocR (pfam10114), AraC (COG2207), FrsA (COG1073), DUF3231 (pfam11553), YdeN (COG3545)
2a38 (TIGR00933), FhlA (COG3604), PRK11360 (two-component system sensor histidine kinase AtoS), RimL (COG1670), Intron_maturas2 (pfam01348), HNHc (smart00507), DAO (pfam01266)