myRT

myRT report for GCA_001641065.1_ASM164106v1

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Seq: KV441334.1 Clostridiales bacterium KLE1615 genomic scaffold Scaffold390, whole genome shotgun sequence (97098 bp)
Overview 1 RT 1: 21065-24684 bp Neighborhood of RT #1 [21065, 24698] RVT-GII GIIM COG2865 Feature: gene Location: 21065-21301 bp Feature: gene Location: 21420-21728 bp Feature: gene Location: 21811-23115 bp Ori: OAD88430.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22057-22675 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 22057-22675 bp Feature: domain Description: GIIM Note: maturase Location: 22726-22936 bp Feature: domain Description: GIIM Note: maturase Location: 22726-22936 bp Feature: gene Location: 23344-23538 bp Feature: gene Location: 23547-24698 bp Ori: OAD88432.1 Feature: domain Description: COG2865 Location: 23562-24684 bp Feature: domain Description: COG2865 Location: 23562-24684 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG2865 (Predicted transcriptional regulator, contains HTH domain )

Seq: KV441312.1 Clostridiales bacterium KLE1615 genomic scaffold Scaffold250, whole genome shotgun sequence (77128 bp)
Overview 1 RT 1: 51810-58663 bp Neighborhood of RT #1 [51810, 58710] vWA_subfamily DUF45 DUF45 RVT-UG2 HsdM RMtype1_S_TRD-CR_like RMtype1_S_TRD-CR_like Feature: gene Location: 51810-52466 bp Ori: OAD89023.1 Feature: domain Description: vWA_subfamily Location: 51837-52215 bp Feature: domain Description: vWA_subfamily Location: 51837-52 2 15 bp Feature: gene Location: 52813-53385 bp Ori: OAD88941.1 Feature: domain Description: DUF45 Location: 52846-53047 bp Feature: domain Description: DUF45 Location: 52 846-53047 bp Feature: domain Description: DUF45 Location: 53053-53356 bp Feature: domain Description: DUF45 Location: 53053-53356 bp Feature: gene Location: 53751-55055 bp Ori: OAD88942.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 53952-54777 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 53952 -54777 bp Feature: gene Location: 55303-57444 bp Ori: OAD88943.1 Feature: domain Description: HsdM Location: 55417-56806 bp Feature: domain Description: HsdM Location: 55417-56806 bp Feature: gene Location: 57457-58710 bp Ori: OAD88944.1 Feature: domain Description: RMtype1_S_TRD-CR_like Location: 57634-58033 bp Feature: domain Description: RMtype1_S_TRD-CR_like Location: 57634-58033 bp Feature: domain Description: RMtype1_S_TRD-CR_like Location: 58147-58663 bp Feature: domain Description: RMtype1_S_TRD-CR_like Location: 58147-58663 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT vWA_subfamily (cd01464), DUF45 (pfam01863), RVT-UG2, HsdM (COG0286), RMtype1_S_TRD-CR_like (cl38903)