myRT

myRT report for GCA_001641405.1_ASM164140v1

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Seq: BDCW01000024.1 Tenacibaculum ovolyticum DNA, contig: contig_14_2, strain: da5A-8, whole genome shotgun sequence (82163 bp)
Overview 1 RT 1: 30233-37654 bp Neighborhood of RT #1 [30233, 37734] HsdM RMtype1_S_Eco3763I-TRD2-CR2_like RMtype1_S_Eco3763I-TRD2-CR2_like RVT-UG15 PDDEXK_4 DUF262 COG3472 Feature: gene Location: 30233-31801 bp Feature: domain Description: HsdM Location: 30254-31751 bp Feature: domain Description: HsdM Location: 30254-31 751 bp Feature: gene Location: 31791-33047 bp Feature: domain Description: RMtype1_S_Eco3763I-TRD2-CR2_like Location: 32088-32328 bp Feature: domain Description: RMtype1 _S_Eco3763I-TRD2-CR2_like Location: 32088-32328 bp Feature: domain Description: RMtype1_S_Eco3763I-TRD2-CR2_like Location: 32457-33000 bp Feature: domain Description: RMtype1 _S_Eco3763I-TRD2-CR2_like Location: 32457-33000 bp Feature: gene Location: 33052-34647 bp Feature: RT Description: RVT-UG15 Note: UG15 RT Location: 33481-33886 bp Feature: RT Description: RVT-UG1 5 Note: UG1 5 RT Location: 33481 -33886 bp Feature: gene Location: 34825-35940 bp Feature: domain Description: PDDEXK_4 Location: 34906-35185 bp Feature: domain Description: PDDEXK_4 Location: 34906-351 85 bp Feature: gene Location: 35944-37734 bp Feature: domain Description: DUF262 Location: 35980-36592 bp Feature: domain Description: DUF262 Location: 35980-36592 bp Feature: domain Description: COG3472 Location: 36979-37654 bp Feature: domain Description: COG3472 Location: 36979-37654 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RMtype1_S_Eco3763I-TRD2-CR2_like (cd17264), RVT-UG15, PDDEXK_4 (pfam14281), DUF262 (pfam03235), COG3472 (Uncharacterized protein )

Seq: BDCW01000044.1 Tenacibaculum ovolyticum DNA, contig: contig_19_5, strain: da5A-8, whole genome shotgun sequence (98591 bp)
Overview 1 RT 1: 37348-45788 bp Neighborhood of RT #1 [37348, 45802] WGR_DNA_ligase COG4715 RVT-Retrons fabG MSMEG_0569_nitr MSMEG_0569_nitr Feature: gene Location: 37348-40368 bp Feature: domain Description: WGR_DNA_ligase Location: 37366-37582 bp Feature: domain Description: WGR_DNA_ligase Location: 37366-37582 bp Feature: gene Location: 40383-42014 bp Feature: domain Description: COG4715 Location: 41787-41988 bp Feature: domain Description: COG4715 Location: 41787-41988 bp Feature: gene Location: 42268-43773 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42817-43435 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 42 817-43435 bp Feature: gene Location: 43837-44553 bp Feature: domain Description: fabG Location: 43840-44551 bp Feature: domain Description: fabG Location: 43840-44551 bp Feature: gene Location: 44759-45802 bp Feature: domain Description: MSMEG_0569_nitr Location: 44771-45407 bp Feature: domain Description: MSMEG_0569_nitr Location: 44771-45407 bp Feature: domain Description: MSMEG_0569_nitr Location: 45563-45788 bp Feature: domain Description: MSMEG_0569_nitr Location: 45563-45788 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WGR_DNA_ligase (cd07998), COG4715 (Uncharacterized conserved protein, contains Zn finger domain ), RVT-Retrons, fabG (PRK12825), MSMEG_0569_nitr (TIGR04046)

Seq: BDCW01000118.1 Tenacibaculum ovolyticum DNA, contig: contig_54_2, strain: da5A-8, whole genome shotgun sequence (25312 bp)
Overview 1 RT 1: 114-3837 bp Neighborhood of RT #1 [114, 3839] RVT-Retrons RtcB RtcB COG4339 Feature: gene Location: 114-1319 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 312-939 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 12-93 9 bp Feature: gene Location: 1672-3063 bp Feature: domain Description: RtcB Location: 1939-2089 bp Feature: domain Description: RtcB Location: 193 9-2089 bp Feature: domain Description: RtcB Location: 2233-3004 bp Feature: domain Description: RtcB Location: 223 3 -3 004 bp Feature: gene Location: 3225-3839 bp Feature: domain Description: COG4339 Location: 3237-3837 bp Feature: domain Description: COG43 3 9 Location: 3 23 7-3 83 7 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, RtcB (pfam01139), COG4339 (Predicted metal-dependent phosphohydrolase, HD superfamily )