myRT

myRT report for GCA_001641925.1_ASM164192v1

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Seq: LSBW01000186.1 Escherichia coli strain TN1 TN1_(single)_contig_7, whole genome shotgun sequence (20340 bp)
Overview 1 RT 1: 5431-7844 bp Neighborhood of RT #1 [5431, 7918] PHA02517 HTH_Tnp_1 RVT-GII group_II_RT_mat IS285 Feature: gene Location: 5431-6249 bp Feature: domain Description: PHA02517 Location: 5446-6238 bp Feature: domain Description: PHA0251 7 Location: 5446-6238 bp Feature: gene Location: 6285-6576 bp Feature: domain Description: HTH_Tnp_1 Location: 6294-6447 bp Feature: domain Description: HTH_Tnp_1 Location: 6294-6447 bp Feature: gene Location: 6852-7088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6855-7038 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6855-7038 bp Feature: gene Location: 7057-7297 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 7069-7282 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 7069-7282 bp Feature: gene Location: 7436-7918 bp Feature: domain Description: IS285 Location: 7466-7844 bp Feature: domain Description: IS285 Location: 7466-7844 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PHA02517 (putative transposase OrfB; Reviewed), HTH_Tnp_1 (pfam01527), RVT-GII, group_II_RT_mat (TIGR04416), IS285 (COG3328)