myRT

myRT report for GCA_001643095.1_ASM164309v1

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Seq: LSNC01000053.1 Methylorubrum populi strain CD11_7 CD11_7_contig_35_consensus, whole genome shotgun sequence (116244 bp)
Overview 1 RT 1: 81877-90391 bp Neighborhood of RT #1 [81877, 91275] TrbG_Ti VirB10 RVT-GII Intron_maturas2 HNHc LysR HEPN_Swt1 COG1483 Feature: gene Location: 81877-82947 bp Feature: domain Description: TrbG_Ti Location: 82258-82888 bp Feature: domain Description: TrbG_Ti Location: 82258-82888 bp Feature: gene Location: 82944-84188 bp Feature: domain Description: VirB10 Location: 83055-84183 bp Feature: domain Description: VirB1 0 Location: 83055-841 83 bp Feature: gene Location: 84414-86279 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84681-85512 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 84681 -8551 2 bp Feature: domain Description: Intron_maturas2 Location: 85653-85911 bp Feature: domain Description: Intron_maturas2 Location: 85653-8591 1 bp Feature: domain Description: HNHc Note: nucleases Location: 86079-86226 bp Feature: domain Description: HNHc Note: nucleases Location: 86079-86226 bp Feature: gene Location: 86906-87865 bp Feature: domain Description: LysR Location: 86915-87767 bp Feature: domain Description: LysR Location: 8691 5-87767 bp Feature: gene Location: 87979-91275 bp Feature: domain Description: HEPN_Swt1 Location: 88015-88345 bp Feature: domain Description: HEPN_Swt1 Location: 8801 5-88345 bp Feature: domain Description: COG1483 Location: 88501-90391 bp Feature: domain Description: COG1 483 Location: 88501 -90391 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TrbG_Ti (TIGR02775), VirB10 (COG2948), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), LysR (COG0583), HEPN_Swt1 (pfam18731), COG1483 (Predicted ATPase, AAA+ superfamily )