myRT

myRT report for GCA_001644125.1_ASM164412v1

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Seq: LUUM01000142.1 Methylosinus sp. R-45379 contig_226, whole genome shotgun sequence (1609 bp)
Overview 1 RT 1: 127-1574 bp Neighborhood of RT #1 [127, 1585] RVT-GII GIIM YhhI Feature: gene Location: 127-1020 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 148-643 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 48-643 bp Feature: domain Description: GIIM Note: maturase Location: 718-922 bp Feature: domain Description: GIIM Note: maturase Location: 71 8-922 bp Feature: gene Location: 1394-1585 bp Feature: domain Description: YhhI Location: 1457-1574 bp Feature: domain Description: YhhI Location: 1 457-1 574 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), YhhI (COG5433)

Seq: LUUM01000294.1 Methylosinus sp. R-45379 contig_76, whole genome shotgun sequence (6557 bp)
Overview 1 RT 1: 3908-6498 bp Neighborhood of RT #1 [3908, 6498] DDE_Tnp_IS66_C HTH_Tnp_1 RVT-GII GIIM DDE_Tnp_IS66 DDE_Tnp_IS66_C Feature: gene Location: 3908-4135 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3983-4094 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 3983-4094 bp Feature: gene Location: 4206-4439 bp Feature: domain Description: HTH_Tnp_1 Location: 4212-4407 bp Feature: domain Description: HTH_Tnp_1 Location: 42 12 -4407 bp Feature: gene Location: 4596-5336 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4602-4932 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4602 -4932 bp Feature: domain Description: GIIM Note: maturase Location: 5016-5223 bp Feature: domain Description: GIIM Note: maturase Location: 5016-52 2 3 bp Feature: gene Location: 5402-6262 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5405-6086 bp Feature: domain Description: DDE_Tnp_IS66 Location: 5405-6086 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 6107-6218 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 6107-62 18 bp Feature: gene Location: 6265-6498 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_IS66_C (pfam13817), HTH_Tnp_1 (pfam01527), RVT-GII, GIIM (pfam08388), DDE_Tnp_IS66 (pfam03050)

Seq: LUUM01000240.1 Methylosinus sp. R-45379 contig_314, whole genome shotgun sequence (1053 bp)
Overview 1 RT 1: 1-678 bp Neighborhood of RT #1 [1, 1046] DDE_Tnp_1 RVT-GII Feature: gene Location: 1-365 bp Feature: domain Description: DDE_Tnp_1 Location: 79-355 bp Feature: domain Description: DDE_Tnp_1 Location: 79-3 55 bp Feature: gene Location: 492-1046 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 501-678 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 501-678 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII