myRT

myRT report for GCA_001644135.1_ASM164413v1

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Seq: LUUJ01000119.1 Methylomonas koyamae strain R-45378 contig_77_(1..35041), whole genome shotgun sequence (35041 bp)
Overview 1 RT 1: 7107-17751 bp Neighborhood of RT #1 [7107, 17816] PRK10060 FIST FIST_C RVT-UG8 RVT-UG3 Aldo_ket_red CirA CirA Feature: gene Location: 7107-8963 bp Ori: OAI11605.1 Feature: domain Description: PRK10060 Location: 7614-8934 bp Feature: domain Description: PRK1 0060 Location: 761 4-8934 bp Feature: gene Location: 8960-10123 bp Ori: OAI11606.1 Feature: domain Description: FIST Location: 9083-9620 bp Feature: domain Description: FIST Location: 9083-9620 bp Feature: domain Description: FIST_C Location: 9626-10049 bp Feature: domain Description: FIST_C Location: 9626-1 0049 bp Feature: gene Location: 10942-12936 bp Ori: OAI11607.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 11458-11902 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 1 458-1 1 902 bp Feature: gene Location: 12933-14195 bp Ori: OAI11608.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 13215-13710 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 321 5-1 371 0 bp Feature: gene Location: 14835-15683 bp Ori: OAI11609.1 Feature: domain Description: Aldo_ket_red Location: 14868-15675 bp Feature: domain Description: Aldo_ket_red Location: 1 4868-1 5675 bp Feature: gene Location: 15777-17816 bp Ori: OAI11610.1 Feature: domain Description: CirA Location: 15792-16368 bp Feature: domain Description: CirA Location: 1 5792-1 6368 bp Feature: domain Description: CirA Location: 16449-17751 bp Feature: domain Description: CirA Location: 1 6449-1 7751 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10060 (cyclic di-GMP phosphodiesterase), FIST (smart00897), FIST_C (pfam10442), RVT-UG8, RVT-UG3, Aldo_ket_red (pfam00248), CirA (COG1629)

Seq: LUUJ01000100.1 Methylomonas koyamae strain R-45378 contig_60_(1..36054), whole genome shotgun sequence (36054 bp)
Overview 1 RT 1: 12559-20780 bp Neighborhood of RT #1 [12559, 20780] RVT-UG21 UshA Feature: gene Location: 12559-12873 bp Feature: gene Location: 12848-13063 bp Feature: gene Location: 13693-15087 bp Ori: OAI13404.1 Feature: RT Description: RVT-UG21 Note: UG21 RT Location: 13792-14203 bp Feature: RT Description: RVT-UG2 1 Note: UG2 1 RT Location: 13792 -142 03 bp Feature: gene Location: 15889-17550 bp Ori: OAI13405.1 Feature: domain Description: UshA Location: 15931-17377 bp Feature: domain Description: UshA Location: 15931-17377 bp Feature: gene Location: 17607-20780 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG21, UshA (COG0737)