myRT

myRT report for GCA_001644415.1_ASM164441v1

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Seq: LSTD01000300.1 Planctomycetaceae bacterium SCGC AG-212-F19 AG-212-F19.84, whole genome shotgun sequence (16589 bp)
Overview 1 RT 1: 3850-11324 bp Neighborhood of RT #1 [3850, 11425] PRK00855 HEAT_2 HEAT_2 HEAT_2 HEAT_2 Aldo_ket_red RVT-Retrons pfam03781 COG2129 Feature: gene Location: 3850-5223 bp Ori: OAI45662.1 Feature: domain Description: PRK00855 Location: 3856-5218 bp Feature: domain Description: PRK00855 Location: 3856-521 8 bp Feature: gene Location: 5574-7772 bp Ori: OAI45663.1 Feature: domain Description: HEAT_2 Location: 5628-5844 bp Feature: domain Description: HEAT_2 Location: 5628-5844 bp Feature: domain Description: HEAT_2 Location: 5880-6048 bp Feature: domain Description: HEAT_2 Location: 5880-6048 bp Feature: domain Description: HEAT_2 Location: 6282-6399 bp Feature: domain Description: HEAT_2 Location: 6282-6399 bp Feature: domain Description: HEAT_2 Location: 6654-6792 bp Feature: domain Description: HEAT_2 Location: 6654-6792 bp Feature: domain Description: Aldo_ket_red Location: 7068-7710 bp Feature: domain Description: Aldo_ket_red Location: 7068-771 0 bp Feature: gene Location: 7856-9343 bp Ori: OAI45664.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8483-9104 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 8483-91 04 bp Feature: gene Location: 9642-10646 bp Ori: OAI45665.1 Feature: domain Description: pfam03781 Location: 9912-10590 bp Feature: domain Description: pfam03781 Location: 991 2-1 0590 bp Feature: gene Location: 10661-11425 bp Ori: OAI45666.1 Feature: domain Description: COG2129 Location: 10685-11324 bp Feature: domain Description: COG21 29 Location: 1 0685-1 1 324 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00855 (argininosuccinate lyase; Provisional), HEAT_2 (pfam13646), Aldo_ket_red (pfam00248), RVT-Retrons, pfam03781 (FGE-sulfatase;Sulfatase-modifying factor enzyme 1), COG2129 (Predicted phosphoesterase, related to the Icc protein )

Seq: LSTD01000304.1 Planctomycetaceae bacterium SCGC AG-212-F19 AG-212-F19.88, whole genome shotgun sequence (16081 bp)
Overview 1 RT 1: 5457-10765 bp Neighborhood of RT #1 [5457, 10788] RVT-CRISPR-like Abi_C Feature: gene Location: 5457-5837 bp Feature: gene Location: 6036-7187 bp Feature: gene Location: 7586-8944 bp Ori: OAI45547.1 Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 7967-8531 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 7967-8531 bp Feature: gene Location: 9128-10000 bp Feature: gene Location: 10036-10788 bp Ori: OAI45549.1 Feature: domain Description: Abi_C Location: 10579-10765 bp Feature: domain Description: Abi_C Location: 10579-10765 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Abi_C (pfam14355)

Seq: LSTD01000254.1 Planctomycetaceae bacterium SCGC AG-212-F19 AG-212-F19.42, whole genome shotgun sequence (30861 bp)
Overview 1 RT 1: 14181-20157 bp Neighborhood of RT #1 [14181, 20157] YtcJ PEBP_bact_arch RVT-Retrons Feature: gene Location: 14181-15869 bp Ori: OAI47941.1 Feature: domain Description: YtcJ Location: 14286-15858 bp Feature: domain Description: YtcJ Location: 14286-15858 bp Feature: gene Location: 16019-16474 bp Ori: OAI47942.1 Feature: domain Description: PEBP_bact_arch Location: 16025-16466 bp Feature: domain Description: PEBP_bact_arch Location: 16025-16466 bp Feature: gene Location: 16582-18183 bp Ori: OAI47943.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 17329-17947 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 173 29-17947 bp Feature: gene Location: 18182-18457 bp Feature: gene Location: 18460-20157 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YtcJ (COG1574), PEBP_bact_arch (cd00865), RVT-Retrons