myRT

myRT report for GCA_001644855.1_ASM164485v1

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Seq: JXBA01000169.1 Ralstonia solanacearum strain CFBP3059 Contig_169, whole genome shotgun sequence (53887 bp)
Overview 1 RT 1: 19485-28132 bp Neighborhood of RT #1 [19485, 28132] HEPN_Apea RVT-UG1 Feature: gene Location: 19485-20063 bp Ori: OAI79397.1 Feature: domain Description: HEPN_Apea Location: 19701-19941 bp Feature: domain Description: HEPN_Apea Location: 1 9701 -1 9941 bp Feature: gene Location: 20754-24599 bp Ori: OAI79398.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 21399-21942 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 21 399-21 942 bp Feature: gene Location: 26565-27050 bp Feature: gene Location: 27062-28132 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HEPN_Apea (pfam18739), RVT-UG1

Seq: JXBA01000389.1 Ralstonia solanacearum strain CFBP3059 Contig_390, whole genome shotgun sequence (1129 bp)
Overview 1 RT 1: 1-1129 bp Neighborhood of RT #1 [1, 1129] RVT-GII GIIM Feature: gene Location: 1-1129 bp Ori: OAI73654.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 262-877 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 62 -877 bp Feature: domain Description: GIIM Note: maturase Location: 937-1129 bp Feature: domain Description: GIIM Note: maturase Location: 937-112 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: JXBA01000244.1 Ralstonia solanacearum strain CFBP3059 Contig_244, whole genome shotgun sequence (15320 bp)
Overview 1 RT 1: 3245-8611 bp Neighborhood of RT #1 [3245, 8611] AhpC AhpF RVT-GII GIIM fur Feature: gene Location: 3245-3808 bp Ori: OAI77855.1 Feature: domain Description: AhpC Location: 3248-3806 bp Feature: domain Description: AhpC Location: 3 248-3 806 bp Feature: gene Location: 3926-5500 bp Ori: OAI77856.1 Feature: domain Description: AhpF Location: 3929-5480 bp Feature: domain Description: AhpF Location: 3 929-5480 bp Feature: gene Location: 5955-7325 bp Ori: OAI77857.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6288-6906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6288-6906 bp Feature: domain Description: GIIM Note: maturase Location: 6966-7164 bp Feature: domain Description: GIIM Note: maturase Location: 6966-7164 bp Feature: gene Location: 7789-8244 bp Ori: OAI77858.1 Feature: domain Description: fur Location: 7798-8206 bp Feature: domain Description: fur Location: 7798-8206 bp Feature: gene Location: 8366-8611 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AhpC (TIGR03137), AhpF (TIGR03140), RVT-GII, GIIM (pfam08388), fur (PRK09462)