myRT

myRT report for GCA_001645135.1_ASM164513v1

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Seq: LXJZ01000224.1 Paraburkholderia ginsengiterrae strain DCY85-1 NODE_73, whole genome shotgun sequence (1877 bp)
Overview 1 RT 1: 75-1287 bp Neighborhood of RT #1 [75, 1466] RVT-GII GIIM Feature: gene Location: 75-1466 bp Ori: OAJ52876.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-1023 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 405-1 023 bp Feature: domain Description: GIIM Note: maturase Location: 1071-1287 bp Feature: domain Description: GIIM Note: maturase Location: 1 071 -1 287 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LXJZ01000216.1 Paraburkholderia ginsengiterrae strain DCY85-1 NODE_66, whole genome shotgun sequence (14035 bp)
Overview 1 RT 1: 7706-13901 bp Neighborhood of RT #1 [7706, 13915] RVT-GII Resolvase Recombinase RVT-GII GIIM Phage_int_SAM_1 INT_RitA_C_like HTH_1 PBP2_DntR_NahR_LinR_like Feature: gene Location: 7706-7888 bp Feature: gene Location: 8905-9186 bp Feature: gene Location: 9398-9769 bp Ori: OAJ53328.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9404-9743 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9404-9743 bp Feature: gene Location: 10064-10852 bp Feature: domain Description: Resolvase Location: 10085-10523 bp Feature: domain Description: Resolvase Location: 10085-1052 3 bp Feature: domain Description: Recombinase Location: 10619-10814 bp Feature: domain Description: Recombinase Location: 10619-10814 bp Feature: gene Location: 10830-11438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10854-11085 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10854-11085 bp Feature: domain Description: GIIM Note: maturase Location: 11154-11370 bp Feature: domain Description: GIIM Note: maturase Location: 11154-11370 bp Feature: gene Location: 11622-12869 bp Ori: OAJ53329.1 Feature: domain Description: Phage_int_SAM_1 Location: 11991-12225 bp Feature: domain Description: Phage_int_SAM_1 Location: 11991-12 2 2 5 bp Feature: domain Description: INT_RitA_C_like Location: 12318-12843 bp Feature: domain Description: INT_RitA_C_like Location: 12 318-12 843 bp Feature: gene Location: 13070-13915 bp Ori: OAJ53330.1 Feature: domain Description: HTH_1 Location: 13103-13211 bp Feature: domain Description: HTH_1 Location: 13103-132 11 bp Feature: domain Description: PBP2_DntR_NahR_LinR_like Location: 13307-13901 bp Feature: domain Description: PBP2 _DntR_NahR_LinR_like Location: 13307-13901 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Resolvase (smart00857), Recombinase (pfam07508), GIIM (pfam08388), Phage_int_SAM_1 (pfam02899), INT_RitA_C_like (cd01188), HTH_1 (pfam00126), PBP2_DntR_NahR_LinR_like (cd08459)

Seq: LXJZ01000140.1 Paraburkholderia ginsengiterrae strain DCY85-1 NODE_23, whole genome shotgun sequence (139802 bp)
Overview 1 RT 1: 39907-46811 bp Neighborhood of RT #1 [39907, 46870] IncA RVT-G2L4 PRK08255 Feature: gene Location: 39907-40587 bp Ori: OAJ59387.1 Feature: domain Description: IncA Location: 40225-40465 bp Feature: domain Description: IncA Location: 40225-40465 bp Feature: gene Location: 40577-41302 bp Feature: gene Location: 41648-42952 bp Ori: OAJ59389.1 Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 41870-42443 bp Feature: RT Description: RVT-G2L4 Note: G2L4 RT Location: 41870-42443 bp Feature: gene Location: 43619-43921 bp Feature: gene Location: 44498-46870 bp Ori: OAJ59391.1 Feature: domain Description: PRK08255 Location: 44501-46811 bp Feature: domain Description: PRK08255 Location: 44501-46811 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IncA, RVT-G2L4, PRK08255 (bifunctional salicylyl-CoA 5-hydroxylase/oxidoreductase)