myRT

myRT report for GCA_001645245.1_ASM164524v1

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Seq: LXPH01000002.1 Escherichia coli strain 2014C-3250 contig002, whole genome shotgun sequence (1570752 bp)
Overview 1 RT 1: 560353-566359 bp Neighborhood of RT #1 [560353, 566364] P Q RVT-Retrons DinI Feature: gene Location: 560353-562120 bp Feature: domain Description: P Location: 560380-561049 bp Feature: domain Description: P Location: 560380-561 049 bp Feature: gene Location: 562120-563151 bp Feature: domain Description: Q Location: 562123-563146 bp Feature: domain Description: Q Location: 5621 23-5631 46 bp Feature: gene Location: 563201-564957 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 563345-563966 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 563345-563966 bp Feature: gene Location: 565603-565938 bp Feature: gene Location: 566131-566364 bp Feature: domain Description: DinI Location: 566173-566359 bp Feature: domain Description: DinI Location: 5661 73-566359 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT P (PHA02535), Q (PHA02536), RVT-Retrons, DinI (pfam06183)

Seq: LXPH01000001.1 Escherichia coli strain 2014C-3250 contig001, whole genome shotgun sequence (3690314 bp)
Overview 1 RT 1: 590894-594993 bp Neighborhood of RT #1 [590894, 594993] RutF PRK01271 RVT-GII GIIM Feature: gene Location: 590894-591463 bp Feature: domain Description: RutF Location: 590948-591452 bp Feature: domain Description: RutF Location: 590948-591452 bp Feature: gene Location: 591467-591610 bp Feature: domain Description: PRK01271 Location: 591470-591608 bp Feature: domain Description: PRK012 71 Location: 591470-591608 bp Feature: gene Location: 591758-593080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 592034-592691 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 592 034-592 691 bp Feature: domain Description: GIIM Note: maturase Location: 592775-592985 bp Feature: domain Description: GIIM Note: maturase Location: 592 775-592 985 bp Feature: gene Location: 593606-593950 bp Feature: gene Location: 594595-594993 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RutF (TIGR03615), PRK01271 (tautomerase PptA), RVT-GII, GIIM (pfam08388)