myRT

myRT report for GCA_001646735.1_ASM164673v1

Download annotations/find similar RTs

Seq: LRRG01000268.1 Rhodococcus opacus strain DSM 43205 contig_285, whole genome shotgun sequence (9110 bp)
Overview 1 RT 1: 731-5132 bp Neighborhood of RT #1 [731, 5683] Phage_int_SAM_1 INT_RitB_C_like Phage_int_SAM_4 INT_RitA_C_like RVT-GII GIIM DDE_5 Feature: gene Location: 731-1714 bp Feature: domain Description: Phage_int_SAM_1 Location: 827-998 bp Feature: domain Description: Phage_int_SAM_1 Location: 827-998 bp Feature: domain Description: INT_RitB_C_like Location: 1064-1652 bp Feature: domain Description: INT_RitB_C_like Location: 1 064-1 652 bp Feature: gene Location: 1711-2943 bp Feature: domain Description: Phage_int_SAM_4 Location: 2053-2287 bp Feature: domain Description: Phage_int_SAM_4 Location: 2053-2287 bp Feature: domain Description: INT_RitA_C_like Location: 2371-2908 bp Feature: domain Description: INT_RitA_C_like Location: 2371 -2908 bp Feature: gene Location: 3126-3764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3129-3375 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 29-3375 bp Feature: domain Description: GIIM Note: maturase Location: 3471-3684 bp Feature: domain Description: GIIM Note: maturase Location: 3471 -3684 bp Feature: gene Location: 3789-4193 bp Feature: gene Location: 4301-5683 bp Feature: domain Description: DDE_5 Location: 4346-5132 bp Feature: domain Description: DDE_5 Location: 4346-51 32 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Phage_int_SAM_4 (pfam13495), INT_RitA_C_like (cd01188), RVT-GII, GIIM (pfam08388), DDE_5 (pfam13546), Phage_int_SAM_1 (pfam02899), INT_RitB_C_like (cd00797)