myRT

myRT report for GCA_001646945.1_AVMART05_1.0

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Seq: LUTV01000001.1 Endozoicomonas ascidiicola strain AVMART05 scaffold_0, whole genome shotgun sequence (1017847 bp)
Overview 1 RT 1: 42113-49458 bp Neighborhood of RT #1 [42113, 49520] RVT-GII Toxin_15 Toxin_15 ANKYR ANKYR ANKYR COG5421 Feature: gene Location: 42113-42247 bp Feature: gene Location: 42266-42421 bp Feature: gene Location: 42813-44237 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43182-43869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 431 82-43869 bp Feature: gene Location: 44603-47272 bp Feature: domain Description: Toxin_15 Location: 44888-45182 bp Feature: domain Description: Toxin_1 5 Location: 44888-451 82 bp Feature: domain Description: Toxin_15 Location: 45374-45560 bp Feature: domain Description: Toxin_1 5 Location: 45374-45560 bp Feature: domain Description: ANKYR Location: 45635-46004 bp Feature: domain Description: ANKYR Location: 45635-46004 bp Feature: domain Description: ANKYR Location: 46604-46934 bp Feature: domain Description: ANKYR Location: 46604-46934 bp Feature: domain Description: ANKYR Location: 46943-47237 bp Feature: domain Description: ANKYR Location: 46943-47237 bp Feature: gene Location: 47868-49520 bp Feature: domain Description: COG5421 Location: 48798-49458 bp Feature: domain Description: COG5421 Location: 48798-49458 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Toxin_15 (pfam07906), ANKYR (COG0666), COG5421 (Transposase )

Seq: LUTV01000002.1 Endozoicomonas ascidiicola strain AVMART05 scaffold_1, whole genome shotgun sequence (849800 bp)
Overview 1 RT 1: 847909-849239 bp Neighborhood of RT #1 [847909, 849394] RVT-GII GIIM Feature: gene Location: 847909-848433 bp Feature: gene Location: 848453-848605 bp Feature: gene Location: 848615-849394 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 848618-848981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 848618-848981 bp Feature: domain Description: GIIM Note: maturase Location: 849029-849239 bp Feature: domain Description: GIIM Note: maturase Location: 84902 9-8492 39 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LUTV01000015.1 Endozoicomonas ascidiicola strain AVMART05 scaffold_14, whole genome shotgun sequence (49361 bp)
Overview 1 RT 1: 47043-49358 bp Neighborhood of RT #1 [47043, 49360] AAA_15 AAA_15 RVT-GII Feature: gene Location: 47043-48536 bp Feature: domain Description: AAA_15 Location: 47064-47346 bp Feature: domain Description: AAA_15 Location: 47064-473 46 bp Feature: domain Description: AAA_15 Location: 47442-47823 bp Feature: domain Description: AAA_15 Location: 47442-47823 bp Feature: gene Location: 49019-49360 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 49313-49358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 493 13 -493 58 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT AAA_15 (pfam13175), RVT-GII

Seq: LUTV01000004.1 Endozoicomonas ascidiicola strain AVMART05 scaffold_3, whole genome shotgun sequence (771815 bp)
Overview 1 RT 1: 253207-262735 bp Neighborhood of RT #1 [253207, 262923] IstB_IS21_ATP IstB_IS21 COG4584 COG4584 RVT-GII Peptidase_C58 Feature: gene Location: 253207-253962 bp Feature: domain Description: IstB_IS21_ATP Location: 253279-253363 bp Feature: domain Description: IstB_IS21_ATP Location: 253279-253363 bp Feature: domain Description: IstB_IS21 Location: 253366-253897 bp Feature: domain Description: IstB_IS21 Location: 253366-253897 bp Feature: gene Location: 253997-255535 bp Feature: domain Description: COG4584 Location: 254093-254903 bp Feature: domain Description: COG4 584 Location: 254 093-254 903 bp Feature: domain Description: COG4584 Location: 254954-255482 bp Feature: domain Description: COG4 584 Location: 254 954 -2554 82 bp Feature: gene Location: 255628-256056 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 255694-255892 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 255694 -255892 bp Feature: gene Location: 256096-256374 bp Feature: gene Location: 256480-262923 bp Feature: domain Description: Peptidase_C58 Location: 262507-262735 bp Feature: domain Description: Peptidase_C58 Location: 262507-262735 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IstB_IS21_ATP (pfam08483), IstB_IS21 (pfam01695), COG4584 (Transposase ), RVT-GII, Peptidase_C58 (pfam03543)

Seq: LUTV01000031.1 Endozoicomonas ascidiicola strain AVMART05 scaffold_30, whole genome shotgun sequence (1625 bp)
Overview 1 RT 1: 347-1363 bp Neighborhood of RT #1 [347, 1623] RVT-GII RAYT Feature: gene Location: 347-517 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365-473 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 365 -473 bp Feature: gene Location: 907-1623 bp Feature: domain Description: RAYT Location: 940-1363 bp Feature: domain Description: RAYT Location: 940-1363 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RAYT (COG1943)

Seq: LUTV01000006.1 Endozoicomonas ascidiicola strain AVMART05 scaffold_5, whole genome shotgun sequence (531136 bp)
Overview 1 RT 1: 341517-345025 bp Neighborhood of RT #1 [341517, 345025] RVT-GII GIIM Feature: gene Location: 341517-341885 bp Feature: gene Location: 342350-342484 bp Feature: gene Location: 342639-343886 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 342840-343497 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 342840-343497 bp Feature: domain Description: GIIM Note: maturase Location: 343581-343794 bp Feature: domain Description: GIIM Note: maturase Location: 343581-343794 bp Feature: gene Location: 344014-344505 bp Feature: gene Location: 344774-345025 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LUTV01000009.1 Endozoicomonas ascidiicola strain AVMART05 scaffold_8, whole genome shotgun sequence (235557 bp)
Overview 1 RT 1: 203675-206841 bp 2 RT 2: 233832-235552 bp Neighborhood of RT #1 [203675, 206843] RVT-GII GIIM COG3526 Neighborhood of RT #2 [233832, 235554] RVT-GII Feature: gene Location: 203675-203944 bp Feature: gene Location: 204021-205268 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 204222-204879 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 204222-20487 9 bp Feature: domain Description: GIIM Note: maturase Location: 204963-205176 bp Feature: domain Description: GIIM Note: maturase Location: 204963-20517 6 bp Feature: gene Location: 206277-206441 bp Feature: gene Location: 206493-206843 bp Feature: domain Description: COG3526 Location: 206574-206841 bp Feature: domain Description: COG3526 Location: 20657 4-206841 bp Feature: gene Location: 233832-234731 bp Feature: gene Location: 234918-235301 bp Feature: gene Location: 235213-235554 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 235507-235552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 235507 -235552 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), COG3526 (Predicted selenoprotein, Rdx family )